PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001347839.2 to PF05057 (DUF676)

XP_001347839.2 has 1201 amino acids

Query:       DUF676  [M=219]
Accession:   PF05057.14
Description: Putative serine esterase (DUF676)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.8e-12   32.3   4.3    6.2e-10   25.0   2.1    2.9  2  XP_001347839.2  


Domain annotation for each sequence (and alignments):
>> XP_001347839.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0   0.00034   0.00034      44      77 ..     748     782 ..     730     792 .. 0.86
   2 !   25.0   2.1   6.2e-10   6.2e-10     140     217 ..     793     867 ..     785     869 .. 0.87

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.00034
          DUF676  44 msennesktfkgidv.lgerlaeevlevvkkkkdk 77 
                      +++++s+++kg++v l+er++ e++e++k+  d+
  XP_001347839.2 748 EKNGIDSFKGKGLHVsLRERIIIEIMESAKNGIDG 782
                     56889999*******9**************99887 PP

  == domain 2  score: 25.0 bits;  conditional E-value: 6.2e-10
          DUF676 140 glalleklkk.slsmeqlgltGrdLflkddkdeknsllykllkdekdlkliealklFkrrvlyanvvndrivplasess 217
                     g  ++e l+k  ++m++l+++ ++L++ +++d+  s+++k+l++++   ++e++k+++++ + ++++n++++++++++ 
  XP_001347839.2 793 GKLFMEALEKlNINMKDLKKD-KNLISLEVYDKILSTMFKILTEMS---FYEDSKFYETLGIKKDILNQSLKDIKIKML 867
                     55566666552459*******.***********************9...************************998765 PP



Or compare XP_001347839.2 to CDD or PaperBLAST