PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS141189 to PF05114 (DUF692)

VIMSS141189 has 288 amino acids

Query:       DUF692  [M=263]
Accession:   PF05114.13
Description: Protein of unknown function (DUF692)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   7.9e-103  329.3   0.0     9e-103  329.1   0.0    1.0  1  VIMSS141189  


Domain annotation for each sequence (and alignments):
>> VIMSS141189  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  329.1   0.0    9e-103    9e-103       2     262 ..      13     277 ..      12     278 .. 0.96

  Alignments for each domain:
  == domain 1  score: 329.1 bits;  conditional E-value: 9e-103
       DUF692   2 vGlglrrelleelle..ekpevdflEvaaenylkaggkarkelealreryplvlHGvslslGsaepldeehlkrlkallerlepalvSeHlsfssagg 97 
                  +Glg+rr+l+e++l+  e++++ f+E a+en+lk+gg ark++++++er+pl+lHG+s+slG+++pld++ ++ +k++++r++ +++S+Hls++++gg
  VIMSS141189  13 AGLGYRRDLAEDFLSlsENSPICFIEAAPENWLKMGGWARKQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG 110
                  8************95325555*************************************************************************9998 PP

       DUF692  98 velndllPlpyteealavvaerikqvqdiLerplllEnvssylafpeselsEaeFlaelvertgcglllDvnNvyvnavNhg.fdpeayldalplerv 194
                   +l+dllPlp+tee ++++a+ri++vqd+L+ ++++En+s+yl+ p +e++E+eFl++++++++cg++lDvnN+yvnavNhg ++pea+l+++++erv
  VIMSS141189 111 -HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAVAREADCGIHLDVNNIYVNAVNHGlLSPEAFLENVDAERV 207
                  .*********************************************************************************779************* PP

       DUF692 195 aeiHlAGh.eekeelliDtHgapvadevwalleealarlgpv.ptllErDnnipplaellaelakarail 262
                   +iH+AGh  e+ elliDtHga+v  +vw+lle a+a+l ++ ptllErD+n+pp++el ae+ak+++++
  VIMSS141189 208 CYIHIAGHdVETPELLIDTHGAAVLPTVWDLLELAYAKLPTIpPTLLERDFNFPPFSELEAEVAKIADYQ 277
                  ********645678**************************999***********************9886 PP



Or compare VIMSS141189 to CDD or PaperBLAST