PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::K4B6C9 to PF05142 (DUF702)

SwissProt::K4B6C9 has 351 amino acids

Query:       DUF702  [M=151]
Accession:   PF05142.16
Description: Domain of unknown function (DUF702)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.5e-69  219.5  10.0    1.5e-69  219.5  10.0    1.9  2  SwissProt::K4B6C9  


Domain annotation for each sequence (and alignments):
>> SwissProt::K4B6C9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.4      0.27      0.27      53      53 ..      61      61 ..      10      81 .. 0.51
   2 !  219.5  10.0   1.5e-69   1.5e-69       2     150 ..     126     273 ..     125     274 .. 0.85

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.27
             DUF702 53 l 53
                        
  SwissProt::K4B6C9 61 G 61
                       1 PP

  == domain 2  score: 219.5 bits;  conditional E-value: 1.5e-69
             DUF702   2 gisCqdCgnqakkdCahrrCRtCCksrgfdCatHvkstwvpaakrrerqqqlaalqaqaaeaeaeaassasssekskrpreesaaasassts 93 
                        gisCqdCgnqakkdC+h+rCRtCCksrgf+C+tHvkstwvpaakrrerqqqlaalq+q++ ++++     ++++k+kr+re+ +a+s  st 
  SwissProt::K4B6C9 126 GISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQQQQQGHNNN-----NNNHKNKRQREDPSASSLVSTR 212
                        799***************************************************99987755433.....4566789999864444444444 PP

             DUF702  94 ....attskseslpeevsseAvFrcvrvsavddgeeevaYqtavkigGhvfkGiLydqGle 150
                            ++  +  ++p++v+++AvF+c+++s+++d+e+++aYq+av+igGhvfkGiLydqG+e
  SwissProt::K4B6C9 213 lpsnTNGLEVGKFPSKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHE 273
                        43322222335************************************************98 PP



Or compare SwissProt::K4B6C9 to CDD or PaperBLAST