PaperBLAST – Find papers about a protein or its homologs

 

Align A7ENU3 to PF05303 (GSKIP_dom)

A7ENU3 has 1311 amino acids

Query:       GSKIP_dom  [M=105]
Accession:   PF05303.16
Description: GSKIP domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-09   23.4   0.0    6.8e-09   22.1   0.0    1.6  1  A7ENU3    


Domain annotation for each sequence (and alignments):
>> A7ENU3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   6.8e-09   6.8e-09      25      96 ..     224     295 ..     208     298 .. 0.92

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 6.8e-09
  GSKIP_dom  25 lpsteevvylnvetkEgnelcielsakGfrivgskndtvkeksekedetkyyetlyaLLdkiSpkyrekFge 96 
                l+++ +++yl+v+t+Eg+++ i   ++Gf +  s++ + + + +++ + ++  +l aLL ++Sp+++ +F++
     A7ENU3 224 LRQKGHLLYLQVTTNEGEQFQITSHVSGFYVNKSSTGKFDPSPKSAPKAHSAHSLLALLGDLSPSFEDSFKR 295
                778899********************************98888899999999******************75 PP



Or compare A7ENU3 to CDD or PaperBLAST