SwissProt::Q8BGR8 has 139 amino acids
Query: GSKIP_dom [M=105]
Accession: PF05303.16
Description: GSKIP domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-39 119.5 0.0 4.9e-39 119.0 0.0 1.2 1 SwissProt::Q8BGR8
Domain annotation for each sequence (and alignments):
>> SwissProt::Q8BGR8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.0 0.0 4.9e-39 4.9e-39 1 105 [] 33 133 .. 33 133 .. 0.98
Alignments for each domain:
== domain 1 score: 119.0 bits; conditional E-value: 4.9e-39
GSKIP_dom 1 lkeEaeaavndvafaVkeisvseklpsteevvylnvetkEgnelcielsakGfrivgskndtvkeksekedetkyyetlyaLLdkiSpkyre 92
++ Eaea+vndv faV+++ vs+++p +++v+y+nvetkE+n++c+el+++G r+vg+++d+v e++ +t y+et+y+LLd++Sp+yre
SwissProt::Q8BGR8 33 MQLEAEAVVNDVLFAVNHMFVSKSMPCADDVAYINVETKERNRYCLELTEAGLRVVGYAFDQV----EDHLQTPYHETVYSLLDTLSPAYRE 120
578************************************************************....99*********************** PP
GSKIP_dom 93 kFgekllekLeel 105
+Fg++ll++Le+l
SwissProt::Q8BGR8 121 AFGNALLQRLEAL 133
**********986 PP
Or compare SwissProt::Q8BGR8 to CDD or PaperBLAST