PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS33463 to PF05305 (DUF732)

VIMSS33463 has 127 amino acids

Query:       DUF732  [M=95]
Accession:   PF05305.14
Description: Protein of unknown function (DUF732)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-24   72.4   1.6    2.3e-24   72.0   1.6    1.1  1  VIMSS33463  


Domain annotation for each sequence (and alignments):
>> VIMSS33463  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.0   1.6   2.3e-24   2.3e-24       3      93 ..      26     116 ..      24     118 .. 0.95

  Alignments for each domain:
  == domain 1  score: 72.0 bits;  conditional E-value: 2.3e-24
      DUF732   3 aallaaalllaapAaAdsaddaFlaalnqagiaygspdaaialGkavCkkl.dsGksaeavvaevkndnsglspeqaaqfvgaAvsayCPeq 93 
                 a ++++a+ +aap +Ad   +aFl+al++agiay++p+ ++alG++vC+++ + G ++e++++++++  +g+s+++a++f+  A+ +yCP+ 
  VIMSS33463  26 AGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVCPMVvAPGGTFESITSRMAE-INGMSRDMASTFTIVAIGTYCPAV 116
                 67889999*******************************************99*************9.9999******************86 PP



Or compare VIMSS33463 to CDD or PaperBLAST