PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS33747 to PF05305 (DUF732)

VIMSS33747 has 125 amino acids

Query:       DUF732  [M=72]
Accession:   PF05305.18
Description: Protein of unknown function (DUF732)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-15   43.4   0.8    2.9e-15   42.9   0.3    1.5  1  VIMSS33747  


Domain annotation for each sequence (and alignments):
>> VIMSS33747  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   0.3   2.9e-15   2.9e-15       4      71 ..      40     108 ..      36     109 .. 0.94

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 2.9e-15
      DUF732   4 aFlaaLd.qaGvtytdpdaaiaaGhqvCdaLdaGkspadvaaallasnpgltadqaaffvgaAiaayCP 71 
                 a+l  ++ + G  ++++daa++ Gh+ C+ +++G+++a+++a++ a+ ++ +++qa+++++ A++ +CP
  VIMSS33747  40 AYLVNVTvRPGYNFANADAALSYGHGLCEKVSRGRPYAQIIADVKADFDTRDQYQASYLLSQAVNELCP 108
                 477777779999********************************************************9 PP



Or compare VIMSS33747 to CDD or PaperBLAST