PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS540025 to PF05305 (DUF732)

VIMSS540025 has 139 amino acids

Query:       DUF732  [M=95]
Accession:   PF05305.14
Description: Protein of unknown function (DUF732)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-24   72.1   1.6      3e-24   71.6   1.6    1.2  1  VIMSS540025  


Domain annotation for each sequence (and alignments):
>> VIMSS540025  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.6   1.6     3e-24     3e-24       3      93 ..      38     128 ..      36     130 .. 0.95

  Alignments for each domain:
  == domain 1  score: 71.6 bits;  conditional E-value: 3e-24
       DUF732   3 aallaaalllaapAaAdsaddaFlaalnqagiaygspdaaialGkavCkkl.dsGksaeavvaevkndnsglspeqaaqfvgaAvsayCPeq 93 
                  a ++++a+ +aap +Ad   +aFl+al++agiay++p+ ++alG++vC+++ + G ++e++++++++  +g+s+++a++f+  A+ +yCP+ 
  VIMSS540025  38 AGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVCPMVvAPGGTFESITSRMAE-INGMSRDMASTFTIVAIGTYCPAV 128
                  67889999*******************************************99*************9.9999******************86 PP



Or compare VIMSS540025 to CDD or PaperBLAST