PaperBLAST – Find papers about a protein or its homologs

 

Align NP_055165.2 to PF05527 (DUF758)

NP_055165.2 has 198 amino acids

Query:       DUF758  [M=181]
Accession:   PF05527.15
Description: Domain of unknown function (DUF758)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.8e-87  276.7   9.6    5.5e-87  276.5   9.6    1.0  1  NP_055165.2  


Domain annotation for each sequence (and alignments):
>> NP_055165.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  276.5   9.6   5.5e-87   5.5e-87       1     181 []      16     196 ..      16     196 .. 0.99

  Alignments for each domain:
  == domain 1  score: 276.5 bits;  conditional E-value: 5.5e-87
       DUF758   1 fsskslalraqKkllskmasksvaklfiddtsselldelyrlakeytknkkeaeklvKnliKivvKvgvllrnkqfsaeelalaekfrkklrqlamta 98 
                  f+sk+la++aqKk+l+km+sks+a+++iddtsse+ldelyr+++eyt+nkkeaek++KnliK+v+K+++l+rn+qf+++elal+ekf+kk++qlamt+
  NP_055165.2  16 FNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYRVTREYTQNKKEAEKIIKNLIKTVIKLAILYRNNQFNQDELALMEKFKKKVHQLAMTV 113
                  89************************************************************************************************ PP

       DUF758  99 isfyevdftfdkavLakllkecrdlllqlverhLtdkslgrikhvfdffanpefLeklfkpdeeyrehlkkivddlnklleeg 181
                  +sf++vd+tfd++vL++ll+ecr++l+q+++rhLt+ks+gr+++vfd+f++ efL++l++p +++++hl+k++d++nk+l+e+
  NP_055165.2 114 VSFHQVDYTFDRNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALYNPFGNFKPHLQKLCDGINKMLDEE 196
                  ********************************************************************************985 PP



Or compare NP_055165.2 to CDD or PaperBLAST