F1RWH6 has 505 amino acids
Query: CDK5RAP3 [M=502] Accession: PF05600.16 Description: CDK5 regulatory subunit-associated protein 3 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5e-201 654.8 2.1 5.7e-201 654.6 2.1 1.0 1 F1RWH6 Domain annotation for each sequence (and alignments): >> F1RWH6 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 654.6 2.1 5.7e-201 5.7e-201 2 502 .] 5 502 .. 4 502 .. 0.97 Alignments for each domain: == domain 1 score: 654.6 bits; conditional E-value: 5.7e-201 CDK5RAP3 2 qnlpIDIqyskLldWLvdRrhvpkdWqkqlkairekiseaiqdmpeseeilqllsgeeinYfhckkIveilketeadskniFGryssqrmkdWqeivklYe 102 q++pIDIq+skLldWLvdRrh++ +Wq+q+ +ireki++aiqdmpeseei+qllsg++i+Yfhc++Ive+lk tea++kniFGryssqrmkdWqeiv lYe F1RWH6 5 QHVPIDIQTSKLLDWLVDRRHCNLKWQSQVLTIREKINAAIQDMPESEEIAQLLSGSYIHYFHCLRIVELLKGTEASTKNIFGRYSSQRMKDWQEIVALYE 105 789************************************************************************************************** PP CDK5RAP3 103 kdnvyLaEaAqilvrnvnYEiPslkkqiaklqqqleelerKeadlkrsaaeaaakyeeackqlgikGknvreELlelvkeLpslfekiaeelkseklskai 203 kdn+yL E++++lvrnvnYEiPslkkqiak+qq+++e++rKe++ + aae++++++++ckq+gi+G+nvr+ELl+lvk+Lps +++i ++++s l +ai F1RWH6 106 KDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQEYSRKEEEGQAGAAEMREQFYHSCKQYGITGDNVRRELLALVKDLPSQLAEIGAAAQS--LGEAI 204 **********************************************************************************************..***** PP CDK5RAP3 204 eyYkafvefvhtekkesevlpllkevqekgnttvyewrtgekpskieepeeevkkeeeeaeeeeseiDw..............dtsveaaeIdwdlekvee 290 ++Y+a+v fv+++ e++vlp+l++vq++gn tvyewrtg++ps +e+p+ e+ e+ e+ +iDw ++s++aaeIdw+ + e F1RWH6 205 DLYQACVGFVCES-PEEQVLPMLRFVQTRGNGTVYEWRTGTEPSVVERPYLEEPPEQVEED----AIDWgdfgvevasegpdsGISAQAAEIDWGIS-L-E 298 ***********99.889**********************************7777666544....5*****************9999********43.3.3 PP CDK5RAP3 291 eaeaeeeeaeIdwgeseeaevdisveesgedveeeesaaegvakgdealslledkeyRnkllddLlELeaFLkqRlvElseestsvlslsqfqsapevlqq 391 ++ +e ++eIdwg+ ++++++i+v e+g++ a+egva+g++al+lle++e+Rn+++d+L+ELe+FL+qR+vE+see+ ++ls+sqfq ap +lq F1RWH6 299 SDSKEAGGDEIDWGD-DATALQITVLEAGTQ------APEGVARGSDALTLLEYPETRNQFIDELMELESFLSQRAVEMSEEA-DILSVSQFQLAPAILQG 391 4457999*******9.99***********98......789******************************************8.***************** PP CDK5RAP3 392 qtkeeieemlsevesvlslltnkklqhLlliktskryvdrlvesLeqklkaeeklkeklkdleekreelrnqlselepkleklvkkTrelkkeiekdlskr 492 qtk ++ +m+s+ ++++ +ltn ++qhL++i++s+ryvdr++e L+qklk+ + l+ k++ + +k++e+ +++++lepkl+ l++kT+el+k+ie+d+skr F1RWH6 392 QTKAKTVSMVSALQDLIGRLTNLRMQHLFMILASPRYVDRVTELLQQKLKQSQLLALKKELMVQKQQEALQEQAALEPKLDLLLEKTKELQKLIEADISKR 492 ***************************************************************************************************** PP CDK5RAP3 493 ykgrpVnlmG 502 y+grpVnlmG F1RWH6 493 YNGRPVNLMG 502 *********9 PP
Or compare F1RWH6 to CDD or PaperBLAST