Q9JLH7 has 504 amino acids
Query: CDK5RAP3 [M=502] Accession: PF05600.16 Description: CDK5 regulatory subunit-associated protein 3 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.1e-195 634.7 2.6 7e-195 634.6 2.6 1.0 1 Q9JLH7 Domain annotation for each sequence (and alignments): >> Q9JLH7 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 634.6 2.6 7e-195 7e-195 2 502 .] 5 501 .. 4 501 .. 0.96 Alignments for each domain: == domain 1 score: 634.6 bits; conditional E-value: 7e-195 CDK5RAP3 2 qnlpIDIqyskLldWLvdRrhvpkdWqkqlkairekiseaiqdmpeseeilqllsgeeinYfhckkIveilketeadskniFGryssqrmkdWqeivklYe 102 q++pIDIq+skLldWLvdRrh++ +Wq+ + +ireki++aiqdmpes+ei+qllsg++i+Yfhc++Iv++lk tea++kniFGryssqrmkdWqei++lYe Q9JLH7 5 QHVPIDIQTSKLLDWLVDRRHCNLKWQSLVLTIREKINTAIQDMPESQEIAQLLSGSYIHYFHCLRIVDLLKGTEASTKNIFGRYSSQRMKDWQEIISLYE 105 789************************************************************************************************** PP CDK5RAP3 103 kdnvyLaEaAqilvrnvnYEiPslkkqiaklqqqleelerKeadlkrsaaeaaakyeeackqlgikGknvreELlelvkeLpslfekiaeelkseklskai 203 kdn+yL E++++lvrnvnYEiPslkkqiak+qq++++++rKe++ + aae++++++++ckq+gi+G+nvr+ELl+lvk+Lps +++i + ++s l +ai Q9JLH7 106 KDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQDYSRKEEEGQAGAAEMREQFYHSCKQYGITGDNVRRELLALVKDLPSQLAEIGAGAQS--LGEAI 204 **********************************************************************************************..***** PP CDK5RAP3 204 eyYkafvefvhtekkesevlpllkevqekgnttvyewrtgekpskieepeeevkkeeeeaeeeeseiDw.............dtsveaaeIdwdlekveee 291 ++Y+a+vefv+++ ++vlp+l++vq kgn tvyewrtg++ps +e+p+ e e+ +e+ eiDw +s+e+ +Idw+ + e+ Q9JLH7 205 DLYQACVEFVCDS-PTEQVLPMLRYVQPKGNSTVYEWRTGTEPSVVERPQLEDPPEQ-VQED---EIDWgdfgleavsdsgnIISAETPGIDWGIS-LES- 298 *************.778****************************999999655554.4455...6**************99678999******43.333. PP CDK5RAP3 292 aeaeeeeaeIdwgeseeaevdisveesgedveeeesaaegvakgdealslledkeyRnkllddLlELeaFLkqRlvElseestsvlslsqfqsapevlqqq 392 + ++ +++Idwg+ ++ + +i+v e+g++ a+egva+g++al+lle++e+Rn+++d+L+ELe+FL+qR+vE+see+ ++ls+sqfq ap +lq q Q9JLH7 299 ESKDAGADKIDWGD-NAVASEITVLETGTE------APEGVARGSDALTLLEYPETRNQFIDELMELEIFLSQRAVEMSEEA-DILSVSQFQLAPAILQGQ 391 346778999****9.99999********97......789******************************************8.****************** PP CDK5RAP3 393 tkeeieemlsevesvlslltnkklqhLlliktskryvdrlvesLeqklkaeeklkeklkdleekreelrnqlselepkleklvkkTrelkkeiekdlskry 493 tke++ +++s+ ++++ +lt+ lqhL++i++s+ryvdr++e L+qklk+ + l+ k+ + ek++e+ +++++lepkl+ l++kTrel+k+ie+d+skry Q9JLH7 392 TKEKMLSLVSTLQHLIGQLTSLDLQHLFMILASPRYVDRVTELLQQKLKQSQLLALKKDLMVEKQQEALQEQAALEPKLDLLLEKTRELQKLIEADISKRY 492 ***************************************************************************************************** PP CDK5RAP3 494 kgrpVnlmG 502 +grpVnlmG Q9JLH7 493 NGRPVNLMG 501 ********9 PP
Or compare Q9JLH7 to CDD or PaperBLAST