SwissProt::Q9JLH7 has 504 amino acids
Query: CDK5RAP3 [M=502]
Accession: PF05600.16
Description: CDK5 regulatory subunit-associated protein 3
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.1e-195 634.7 2.6 7e-195 634.6 2.6 1.0 1 SwissProt::Q9JLH7
Domain annotation for each sequence (and alignments):
>> SwissProt::Q9JLH7
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 634.6 2.6 7e-195 7e-195 2 502 .] 5 501 .. 4 501 .. 0.96
Alignments for each domain:
== domain 1 score: 634.6 bits; conditional E-value: 7e-195
CDK5RAP3 2 qnlpIDIqyskLldWLvdRrhvpkdWqkqlkairekiseaiqdmpeseeilqllsgeeinYfhckkIveilketeadskniFGryssqrmkd 93
q++pIDIq+skLldWLvdRrh++ +Wq+ + +ireki++aiqdmpes+ei+qllsg++i+Yfhc++Iv++lk tea++kniFGryssqrmkd
SwissProt::Q9JLH7 5 QHVPIDIQTSKLLDWLVDRRHCNLKWQSLVLTIREKINTAIQDMPESQEIAQLLSGSYIHYFHCLRIVDLLKGTEASTKNIFGRYSSQRMKD 96
789***************************************************************************************** PP
CDK5RAP3 94 WqeivklYekdnvyLaEaAqilvrnvnYEiPslkkqiaklqqqleelerKeadlkrsaaeaaakyeeackqlgikGknvreELlelvkeLps 185
Wqei++lYekdn+yL E++++lvrnvnYEiPslkkqiak+qq++++++rKe++ + aae++++++++ckq+gi+G+nvr+ELl+lvk+Lps
SwissProt::Q9JLH7 97 WQEIISLYEKDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQDYSRKEEEGQAGAAEMREQFYHSCKQYGITGDNVRRELLALVKDLPS 188
******************************************************************************************** PP
CDK5RAP3 186 lfekiaeelkseklskaieyYkafvefvhtekkesevlpllkevqekgnttvyewrtgekpskieepeeevkkeeeeaeeeeseiDw..... 272
+++i + ++s l +ai++Y+a+vefv+++ ++vlp+l++vq kgn tvyewrtg++ps +e+p+ e e+ +e+ eiDw
SwissProt::Q9JLH7 189 QLAEIGAGAQS--LGEAIDLYQACVEFVCDS-PTEQVLPMLRYVQPKGNSTVYEWRTGTEPSVVERPQLEDPPEQ-VQED---EIDWgdfgl 273
***********..******************.778****************************999999655554.4455...6******** PP
CDK5RAP3 273 ........dtsveaaeIdwdlekveeeaeaeeeeaeIdwgeseeaevdisveesgedveeeesaaegvakgdealslledkeyRnkllddLl 356
+s+e+ +Idw+ + e+ + ++ +++Idwg+ ++ + +i+v e+g++ a+egva+g++al+lle++e+Rn+++d+L+
SwissProt::Q9JLH7 274 eavsdsgnIISAETPGIDWGIS-LES-ESKDAGADKIDWGD-NAVASEITVLETGTE------APEGVARGSDALTLLEYPETRNQFIDELM 356
******99678999******43.333.346778999****9.99999********97......789************************** PP
CDK5RAP3 357 ELeaFLkqRlvElseestsvlslsqfqsapevlqqqtkeeieemlsevesvlslltnkklqhLlliktskryvdrlvesLeqklkaeeklke 448
ELe+FL+qR+vE+see+ ++ls+sqfq ap +lq qtke++ +++s+ ++++ +lt+ lqhL++i++s+ryvdr++e L+qklk+ + l+
SwissProt::Q9JLH7 357 ELEIFLSQRAVEMSEEA-DILSVSQFQLAPAILQGQTKEKMLSLVSTLQHLIGQLTSLDLQHLFMILASPRYVDRVTELLQQKLKQSQLLAL 447
****************8.************************************************************************** PP
CDK5RAP3 449 klkdleekreelrnqlselepkleklvkkTrelkkeiekdlskrykgrpVnlmG 502
k+ + ek++e+ +++++lepkl+ l++kTrel+k+ie+d+skry+grpVnlmG
SwissProt::Q9JLH7 448 KKDLMVEKQQEALQEQAALEPKLDLLLEKTRELQKLIEADISKRYNGRPVNLMG 501
*****************************************************9 PP
Or compare SwissProt::Q9JLH7 to CDD or PaperBLAST