XP_018651060.1 has 2339 amino acids
Query: CDK5RAP3 [M=502]
Accession: PF05600.16
Description: CDK5 regulatory subunit-associated protein 3
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-23 67.8 7.0 1.3e-22 66.2 7.0 1.7 1 XP_018651060.1
Domain annotation for each sequence (and alignments):
>> XP_018651060.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 66.2 7.0 1.3e-22 1.3e-22 268 482 .. 2074 2318 .. 2040 2325 .. 0.83
Alignments for each domain:
== domain 1 score: 66.2 bits; conditional E-value: 1.3e-22
CDK5RAP3 268 s......eiDwdtsveaaeIdwdlekveeeaeaeeeeaeIdwge....seeaevdisveesgedveeeesaaegvakgdealslledkeyRnk 350
+ +i wd ++e ++Id++ +ve+ ++ e e ++I + ++ +vd +++ + +++e + va+g +a ll++ + R+
XP_018651060.1 2074 QlilslmQILWD-ENEVGAIDFGPFDVESVENIEIERENIVSTSssgmPDNPSVDAASQSNVTLSIDE--RKPIVASGASARYLLDSADGRQA 2163
145666699999.7899******888888888999999996655443344555555555555544444..6789******************* PP
CDK5RAP3 351 llddLlELeaFLkq.....................RlvElseest..svlslsqfqsapevlqqqtkeeieemlsevesvlslltnkklqhLl 420
ll+dLlEL+aFL+ R v s+ + ++ ++q+ap+ l ++t+++i++m++ v+++l++lt++ l +L+
XP_018651060.1 2164 LLNDLLELNAFLQRfqedlferldnesenqlsrtgRNVFKSSGGVrcDTIQNMIIQNAPNDLLSYTSNDISKMIELVKEALTKLTTSSLSQLM 2256
*************999*****888888888886664433333322468999999*************************************** PP
CDK5RAP3 421 liktskryvdrlvesLeqklkaeeklkeklkdleekreelrnqlselepkleklvkkTrelk 482
+i+t y+drl++ L ++++e ++++++ ++ ++ +++e ++l++l +++++l
XP_018651060.1 2257 MIRTRIGYLDRLTDRLLDYRRQAELARTRVSQTQKLIDKALLEQQEKTTQLAQLKNSCKKLV 2318
**********************************************************9986 PP
Or compare XP_018651060.1 to CDD or PaperBLAST