PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS568689 to PF05656 (DUF805)

VIMSS568689 has 108 amino acids

Query:       DUF805  [M=105]
Accession:   PF05656.14
Description: Protein of unknown function (DUF805)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.8e-21   62.8   2.1    2.2e-21   62.5   2.1    1.1  1  VIMSS568689  


Domain annotation for each sequence (and alignments):
>> VIMSS568689  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.5   2.1   2.2e-21   2.2e-21       2      97 ..      15     104 ..      14     107 .. 0.92

  Alignments for each domain:
  == domain 1  score: 62.5 bits;  conditional E-value: 2.2e-21
       DUF805   2 fdfkGRasRsefwwfvlfllllvivlallaavlaaaavasalsvvlallllvpslavtvRRlHDtgrsgwllllllvplialllllvllllpgtpg 97 
                  fdfkGR++R ++w +vl+++ll +vl+ l           ++  ++a++ ++p +a++vRR++Dtgr+  +++++l+p+i++l+ll++++ p+ + 
  VIMSS568689  15 FDFKGRTKRIDYWTIVLVNVLLGLVLNQLQGG------FYSIYALFAVASIIPGVAMQVRRIRDTGRQWQWIFIALIPFIGALWLLWIVIGPSAES 104
                  89***********************9998765......4789999***********************************9999999999998765 PP



Or compare VIMSS568689 to CDD or PaperBLAST