PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS57014 to PF05656 (DUF805)

VIMSS57014 has 117 amino acids

Query:       DUF805  [M=107]
Accession:   PF05656.18
Description: Protein of unknown function (DUF805)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-39  120.6   0.5    2.3e-39  120.4   0.5    1.0  1  VIMSS57014  


Domain annotation for each sequence (and alignments):
>> VIMSS57014  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  120.4   0.5   2.3e-39   2.3e-39       1     107 []      12     113 ..      12     113 .. 0.96

  Alignments for each domain:
  == domain 1  score: 120.4 bits;  conditional E-value: 2.3e-39
      DUF805   1 yfsfsGRarRkeywwfvlvlvlvlivlllllallgasallgsalalllalllllpsllavtvRRlHDigrsgwwlllllipliglivllvllllpgtpg 99 
                 yf+f+GRarRkeyw+f+lv+++++++l+++l+l++        +a l++l++llp+ l vt+RRlHDi++sgww+l++lip++g ++l++ll++++++g
  VIMSS57014  12 YFDFNGRARRKEYWMFTLVNIIISVALSVVLGLIS---EKLLPIANLYSLAVLLPA-LGVTARRLHDINKSGWWMLIALIPIVG-LYLIYLLAKDSDAG 105
                 9********************************95...45677899**********.**************************9.99************ PP

      DUF805 100 enrYGpdp 107
                 +n+YG++p
  VIMSS57014 106 QNQYGQNP 113
                 ******98 PP



Or compare VIMSS57014 to CDD or PaperBLAST