VIMSS41940 has 311 amino acids
Query: DUF808 [M=303]
Accession: PF05661.16
Description: Protein of unknown function (DUF808)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-128 413.3 14.7 3.2e-128 413.1 14.7 1.0 1 VIMSS41940
Domain annotation for each sequence (and alignments):
>> VIMSS41940
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 413.1 14.7 3.2e-128 3.2e-128 2 302 .. 4 301 .. 3 302 .. 0.96
Alignments for each domain:
== domain 1 score: 413.1 bits; conditional E-value: 3.2e-128
DUF808 2 gllaLlDdiaalaklaaaslDDvaaaakkaakkaagvvvDDlavtaqqvsgvkaeRElpvvwkiakgSllNKlvillPaalllsafapwaitplLmlGg 100
gl+aLlDd+aa+aklaaas+DD++aaa +a++ka+gvvvDD+avt+++v+g+++eRElpv+wkiakgSl+NK+v++lP++llls+f+pwa++plLmlGg
VIMSS41940 4 GLVALLDDVAAIAKLAAASVDDIGAAAGRAGAKAVGVVVDDTAVTPRYVAGFRPERELPVIWKIAKGSLFNKIVLILPVILLLSQFVPWAMNPLLMLGG 102
8************************************************************************************************** PP
DUF808 101 ayLcfEGaeKvleklhkkeekeeeeeekeeadlaelEkekvkgairtDfiLsaEiivialgevaeeslltqvlvlvvvavlitvgVYGvValivklDdv 199
+yL+fEGaeK++e+l +++e+ ++++ + e+Ek++v+gairtDfiLsaEi+vial+ev+e++l+ ++++lv+va+lit++VYGvV+livk+Dd+
VIMSS41940 103 LYLSFEGAEKLYEALTGG--DHDEAGDAAAVGTPEHEKQMVSGAIRTDFILSAEIMVIALAEVTEQALFVRAVTLVIVALLITLLVYGVVGLIVKMDDI 199
***************533..34555556667899***************************************************************** PP
DUF808 200 GlalakkkesklaralGrglvkamPkllkllsvvGtiAmllVgGgilvhgleelglealaelvhelaeavaeaaaalggvlewlvetllsavvGlvvGa 298
Gl++a+ + ++ralGrglv+ mP+++++lsvvGt+Aml+VgG+ilv gle++g+ +la+++ + aea+ +a lgg+++w+vetl sa+vGl+vGa
VIMSS41940 200 GLKMAQ-GRLGTTRALGRGLVRGMPVVMSVLSVVGTAAMLWVGGHILVSGLEKFGFGWLAHAIYHDAEAAGHALPFLGGAVTWFVETLGSAMVGLAVGA 297
******.669999************************************************************99************************ PP
DUF808 299 vvva 302
++v
VIMSS41940 298 LIVG 301
*985 PP
Or compare VIMSS41940 to CDD or PaperBLAST