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Align VIMSS239549 to PF05728 (UPF0227)

VIMSS239549 has 258 amino acids

Query:       UPF0227  [M=187]
Accession:   PF05728.16
Description: Uncharacterised protein family (UPF0227)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-09   24.6   0.0    2.5e-09   23.5   0.0    1.5  1  VIMSS239549  


Domain annotation for each sequence (and alignments):
>> VIMSS239549  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.5   0.0   2.5e-09   2.5e-09      41     182 ..      88     245 ..      72     252 .. 0.67

  Alignments for each domain:
  == domain 1  score: 23.5 bits;  conditional E-value: 2.5e-09
      UPF0227  41 dpqqalkeleklvaelgdekpllvGssLGGyyatrlgerf..glrq.vllnPalkpeenlagklgeqanqytgetyvleeyhiielkalevsr..... 130
                  d +q+l  ++++    + e+++l G s+GG  a  ++     ++++ vl +Pa++  e + g   +   qy      +e+  + +   l+++r     
  VIMSS239549  88 DARQILDFVKRQPTTDV-ERIGLLGLSMGGAIAGIIARERkeDVKAlVLWAPAFNMPELIMGEGAR---QY---GAIMESLGYVDIGGLKLDRafved 178
                  55555555655555555.44****************97541156778999****999988655444...55...333444444444444444444566 PP

      UPF0227 131 ..........lkrperilvllskqDevldy....rravaeyraaaeiveddg.dHkfkdfsrhlqqi 182
                               ++++l++++++De ++y    r  ++ y + a +v  +g dH fk+++ + ++i
  VIMSS239549 179 iakfnifelsRGYEGKVLIVHGTNDEAVEYrisdRILQEVYGDNAFRVTIEGaDHTFKNLEWERKAI 245
                  6677777655555899**************44433345556555566755555******99776555 PP



Or compare VIMSS239549 to CDD or PaperBLAST