PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::P68460 to PF05768 (DUF836)

SwissProt::P68460 has 124 amino acids

Query:       DUF836  [M=82]
Accession:   PF05768.14
Description: Glutaredoxin-like domain (DUF836)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
      2e-20   59.3   0.1    2.3e-20   59.1   0.1    1.0  1  SwissProt::P68460  


Domain annotation for each sequence (and alignments):
>> SwissProt::P68460  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.1   2.3e-20   2.3e-20       2      82 .]       5     112 ..       4     112 .. 0.92

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 2.3e-20
                        EEEEE-TT-HHHHHHHHHHHHHCCCTTEEEEEEETT......T-CC.CHC......................CCCTTTTEEEECTTCGGB.T CS
             DUF836   2 ltLyskpgChlCeqakekLkelkleegleleviDIa......kdee.lea......................kYgleipvlalegvkktssl 64 
                        l++++kp+C++Ce+++++++  +l+++++++++DI+      +d + l++                      kY+++++++a+++++k++++
  SwissProt::P68460   5 LIIFGKPYCSICENVSDAVE--ELKSEYDILHVDILsfflkdGDSSmLGDvkrgtlignfaahlsnyivsifKYNPQTKQMAFVDINKSLDF 94 
                        89******************..778999********99986433335666999*************************************** PP

                        CCECGCCB-HHHHHHHHH CS
             DUF836  65 leelswrldeeqLaaele 82 
                        ++++++ ++ e L++e+e
  SwissProt::P68460  95 TKTDKSLVNLEILKSEIE 112
                        ***************996 PP



Or compare SwissProt::P68460 to CDD or PaperBLAST