PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS201883 to PF05768 (DUF836)

VIMSS201883 has 86 amino acids

Query:       DUF836  [M=82]
Accession:   PF05768.14
Description: Glutaredoxin-like domain (DUF836)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-09   24.7   0.0    1.6e-09   24.4   0.0    1.2  1  VIMSS201883  


Domain annotation for each sequence (and alignments):
>> VIMSS201883  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.4   0.0   1.6e-09   1.6e-09       2      57 ..       3      66 ..       2      80 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.4 bits;  conditional E-value: 1.6e-09
                 EEEEE-TT-HHHH...HHHHHHHHHCCCTTEEEEEEETT....T-CCCHC...CCCTTTTEEEECT CS
       DUF836  2 ltLyskpgChlCe...qakekLkelkleegleleviDIa....kdeelea...kYgleipvlaleg 57
                 ++++++pgC+ C    q++e+L+  +++++++   +DI     ++ +le+   k  +++p++++++
  VIMSS201883  3 VVIFGRPGCPYCVravQLSEQLV--EKRDDFKFRYVDIHaegiSKADLEKtvgKPVETVPQIFVDE 66
                 789**********5555666666..7889999******9766655556665666777888888887 PP



Or compare VIMSS201883 to CDD or PaperBLAST