PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS236454 to PF05768 (DUF836)

VIMSS236454 has 93 amino acids

Query:       DUF836  [M=82]
Accession:   PF05768.14
Description: Glutaredoxin-like domain (DUF836)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.6e-09   22.2   0.0    8.7e-09   22.1   0.0    1.1  1  VIMSS236454  


Domain annotation for each sequence (and alignments):
>> VIMSS236454  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   0.0   8.7e-09   8.7e-09       6      58 ..      14      69 ..      10      91 .. 0.76

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 8.7e-09
                 E-TT-HHHHHHHHHHHHHCCCTT..EEEEEEETTT-CCCHCCCC.TTTTEEEECTT CS
       DUF836  6 skpgChlCeqakekLkelkleeg..leleviDIakdeeleakYg.leipvlalegv 58
                 s   C+ C   k +L+el+++ g  +e +v+D+++++el +kYg + +p l +++ 
  VIMSS236454 14 SATWCGPCRMQKPILEELEKKYGdkVEFKVVDVDENQELASKYGiHAVPTLIIQKD 69
                 5567************977776677******************9457999999883 PP



Or compare VIMSS236454 to CDD or PaperBLAST