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Align F5Y248 to PF05787 (DUF839)

F5Y248 has 756 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   4.6e-143  464.1   2.9   5.6e-143  463.8   2.9    1.1  1  F5Y248    


Domain annotation for each sequence (and alignments):
>> F5Y248  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  463.8   2.9  5.6e-143  5.6e-143       2     524 .]      83     700 ..      82     700 .. 0.88

  Alignments for each domain:
  == domain 1  score: 463.8 bits;  conditional E-value: 5.6e-143
  DUF839   2 gfgplaaklddlvavpegyeakvlvrwGdklfagapefd..qsaeaqekqvgynhDgmaffpls........rsadeglLvvNhEytseeilf.....ekekp 89 
             +f+p+ +++ d+v vp+gy+a+++ ++Gd+l+a++pe++   + ++ e++ g +hDgm++f l+        + +++glLv+NhE   ++ l+      +++ 
  F5Y248  83 NFQPVPKSKADAVLVPRGYTATPIYATGDPLAATVPEYLndGTDTDFEHRAGDQHDGMEYFGLNatgtardpNGSKRGLLVMNHEALVDQFLHangvtAATAT 185
             799***********************************97666778899**************988877765556699***********99998888766666 PP

  DUF839  90 spvtaelvekelaalGvtvveisrkagkwqvvrdsklnrritantemrlsGPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfgge.e 191
             + +   +v+ke+aa+Gv+v e++r+ +++  +r s++nrr+t  t+m++ GPa+g  l+ t+ +++g+++ GT+nNC  G+TpWGt+Lt+EEn+ gyf  +  
  F5Y248 186 AGRPVAEVDKEIAAHGVSVAEVQRRGQSFAYDRGSRYNRRVTPLTPMQIHGPARGDGLMVTRYSPDGTTCRGTINNCGTGYTPWGTFLTGEENWAGYFTRSgG 288
             7777889*****************************************************************************************7754431 PP

  DUF839 192 a..............vkadqkryGit.gttgy............erFdva...........nepkkfGyvvEvdpvdprstpvkrtalGrfkHEaaavvvedd 256
             +              +    +r G + g+ ++            +r++++           ne +++Gy+vE+dp+d+++  +krtalGrf+HE+aa+ + ++
  F5Y248 289 DdaarggpmaksvvsL----RRSGRNaGSASRhrwetagtddkyARWNISqvgagpaedyrNELNTYGYIVEIDPYDKNVAIRKRTALGRFAHESAAFGLRAP 387
             1358999998866552....44444333322234466666666688888899999999999****************************************** PP

  DUF839 257 kr.vvvYlgdDerkeylYkFvsndrvgtgns......kansaLldeGtLyvakfnedgtveWvplvegqgglta.eng..fadqaevlvktrlaadkvGatkm 349
             ++ ++vY+gdD+++ey+YkFvs+ + ++ +        +  + ldeG Lyvakf+ dgt+eW++l+++++          fa+qa+v+v++rlaad+vGat+m
  F5Y248 388 GQpLAVYMGDDSQGEYMYKFVSKMPWNPADAepanriTTGDKYLDEGKLYVAKFAGDGTGEWIELSMANPAVAGyA-AyaFANQADVVVNARLAADAVGATRM 489
             *9899**********************99986666666777899************************99888852.336*********************** PP

  DUF839 350 drpEdievnPttgevyvvltnnkkrde..................skidsanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedaka...asaesse 431
             drpE+++v+P+tgevy +ltnn++r+                   + + +a  +a+n +G+i+rl+e+ +++aat+f+wd++l   + +da+    +  + ++
  F5Y248 490 DRPEWCAVHPVTGEVYYTLTNNANRKVsptgsqqpvdpanprsynDAATEAPASARNVNGHIIRLREDGGRGAATRFAWDIYLFGAE-ADADParvNLSGLND 591
             ***********************9988999999888888887776666999999***************************998876.55555577999**** PP

  DUF839 432 gndlespDnlafdpa.GrlwiatDgsgskde...................llgvta.eGkvynlarndGnnvltsdaargevkrfltepegsEvtGvtfsPdg 513
             ++d++spD+l+f+p+ G   i+tD  + +de                   +l+ t+ +G + +++ + G     + +++ ++ rfl +p+++E+tGvt +Pdg
  F5Y248 592 DQDFSSPDGLWFSPKtGLCFIQTDDGAYTDEtncmmligrpgrvgdgqpvTLNYTRaDGTTAEVTTHVG-----AKPTAATLARFLVGPVDCEITGVTETPDG 689
             *************8637778***9998888889**9888777777777766666642466666666665.....899************************** PP

  DUF839 514 ktlfvnvqhPg 524
             k++fvnvqhPg
  F5Y248 690 KAIFVNVQHPG 700
             **********9 PP



Or compare F5Y248 to CDD or PaperBLAST