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Align VIMSS242264 to PF05787 (DUF839)

VIMSS242264 has 490 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.2e-94  304.4   5.1    5.8e-74  236.1   8.6    2.7  2  VIMSS242264  


Domain annotation for each sequence (and alignments):
>> VIMSS242264  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.0   4.2e-21   4.2e-21       1     114 [.      61     159 ..      61     163 .. 0.91
   2 !  236.1   8.6   5.8e-74   5.8e-74     154     524 .]     163     475 ..     160     475 .. 0.92

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 4.2e-21
       DUF839   1 lgfgplaaklddlvavpegyeakvlvrwGdklfagapefdqsaeaqekqvgynhDgmaffplsrsadeglLvvNhEytseeilfekekpspvtaelve 98 
                  +g+gpl +++d+++a+p+g+++++++ +G +           + ++ +++++nhDg+a+f++  ++ ++lLv+NhE++ +++ +   +p p+t++lv+
  VIMSS242264  61 VGYGPLLPDPDGILALPAGFRYEIITYSGRT-----------KLESGEYTPSNHDGTAAFDG--PRGTTLLVNNHELGGHRDDW--PHPVPLTEGLVY 143
                  589**************************43...........33445679************..8*****************88..************ PP

       DUF839  99 kelaalGvtvveisrk 114
                  +++aa+G+tvve++r 
  VIMSS242264 144 DPAAAGGCTVVEVRRG 159
                  *************774 PP

  == domain 2  score: 236.1 bits;  conditional E-value: 5.8e-74
       DUF839 154 aegvkilGTanNCagGtTpWGtyLtcEEnfngyfggeeavkadqkryGitgttgyerFdvanepkkfGyvvEvdpvdp..rstpvkrtalGrfkHEaa 249
                  ae+v i+GTa+NCagG+TpWGt+LtcEE++++  g                ++         ++k++Gyv+Evdp+d+  + +p++++alGr++HEa+
  VIMSS242264 163 AEWVGIAGTATNCAGGSTPWGTWLTCEETEDRA-G----------------EE--------GMTKDHGYVFEVDPEDRraNREPKPVKALGRYAHEAV 235
                  68999*************************965.3................22........3589************98999**************** PP

       DUF839 250 avvveddkrvvvYlgdD..erkeylYkFvsndrvgtgnskansaLldeGtLyvakfned.................gtveWvplvegqggltaengfa 328
                  ++   d+kr+++Yl++D    +++lY++++ +++++g+ + ++   d G+L+++k+ ++                   v+Wv++++           +
  VIMSS242264 236 VI---DPKRGHAYLTEDasGPNGLLYRWTPPEHFRHGRGRLRTLADDAGVLQAFKCFDSggkfvddlsratrtgtvYGVDWVDVPD-----------R 319
                  **...************88889***************9999999999**************************999779*****77...........6 PP

       DUF839 329 dqaevlvktrlaadkvGatkmdrpEdievnPttgevyvvltnnkkrdeskidsanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedakaas 426
                  d+++++v++++aa +   t+++++E+++     g +yvv+++++       d++ +r+++  Gq++ +++++r       t++l +l G        +
  VIMSS242264 320 DAQTTSVRKQFAAGE--VTRARKLEGMW--WADGGAYVVSSFAR-------DESPGRPHD--GQVWFYDPKRR-------TLTLKVLLGV-------N 390
                  999999999999977..6**********..6667*********9.......999****99..*********99.......9999999995.......6 PP

       DUF839 427 aessegndlespDnlafdpaGrlwiatDgsgskdellgvtaeGkvynlarndGnnvltsdaargevkrfl.tepegsEvtGvtfsPdgktlfvnvqhP 523
                  a+ s++++++ pDn++++p+G+l+ia+Dg+g ++ l+g+t++G++y +arn             e+++ + ++pe sE+tGvtfsPdg+tl+ n+q+P
  VIMSS242264 391 ADPSADGAFDGPDNITVSPYGGLVIAEDGDGVQH-LFGATDSGRTYPIARN-------------ELNLGTeDDPEYSEFTGVTFSPDGRTLYANIQTP 474
                  78899**************************876.8************965.............688888789************************* PP

       DUF839 524 g 524
                  g
  VIMSS242264 475 G 475
                  9 PP



Or compare VIMSS242264 to CDD or PaperBLAST