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Align VIMSS244072 to PF05787 (DUF839)

VIMSS244072 has 692 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
     4e-187  609.5   0.2   4.8e-187  609.2   0.2    1.0  1  VIMSS244072  


Domain annotation for each sequence (and alignments):
>> VIMSS244072  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  609.2   0.2  4.8e-187  4.8e-187       2     524 .]     106     653 ..     105     653 .. 0.96

  Alignments for each domain:
  == domain 1  score: 609.2 bits;  conditional E-value: 4.8e-187
       DUF839   2 gfgplaaklddlvavpegyeakvlvrwGdklfagapefd...qsaeaqekqvgynhDgmaffplsrsadeglLvvNhEytseeilfekekpspvtael 96 
                  +f+p+a+++dd+v+vpegy+++v++rwG+++ +gap+fd   qsa aq+ q+gyn+D++a++pl++++d++lLv+NhEyt+e ++f+ ++p++ t+e+
  VIMSS244072 106 RFTPVAPNTDDAVTVPEGYRQDVVIRWGEPILRGAPAFDpekQSAGAQAGQFGYNNDFLALLPLRGEHDRQLLVANHEYTDEVLMFRGYDPENPTREQ 203
                  79************************************************************************************************ PP

       DUF839  97 vekelaalGvtvveisrk..agkwqvvrdsklnrritantemrlsGPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfggeea 192
                  ve ++aa+G +vv ++++  +g++++v++++lnrrita++e+rl+GPaags+l++tsad++g+k+lGT+nNC+gGtTpWGt+L++EEnfn+yf++  +
  VIMSS244072 204 VEIAWAAHGLSVVAVQEErrSGRLTAVSRHRLNRRITATSEFRLTGPAAGSDLVRTSADRSGRKVLGTLNNCSGGTTPWGTTLHGEENFNQYFAN--S 299
                  ***************9988899************************************************************************7..5 PP

       DUF839 193 vkadqkryGit.gttgy......erFdva...nepkkfGyvvEvdpvdprstpvkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsndr 280
                  +++++kryGi  g+t++      +rFdva   ne ++fGyvvE+dp+dp+stp+k+talGrfkHEaa+v++++d+r vvY+gdDer++y+YkFv ++r
  VIMSS244072 300 SRDTDKRYGIGtGATERkwerfdKRFDVArepNEVHRFGYVVELDPYDPESTPRKHTALGRFKHEAATVRLTQDGRPVVYTGDDERFDYFYKFVGSKR 397
                  99********9999988998888899998********************************************************************* PP

       DUF839 281 vgtgns....kansaLldeGtLyvakfned...................gtveWvplvegqgglta.engfadqaevlvktrlaadkvGatkmdrpEd 354
                  +++gns    ++n +LldeGtLyvak++ d                   g +eW+plv+++++    +   ++++ev+v+trla dkvGatkmdrpEd
  VIMSS244072 398 MRHGNSrwarEHNLSLLDEGTLYVAKLSGDspaieidgtgtlprdgefdGGGEWIPLVTATEDGAVsHVEGMSAEEVCVFTRLAGDKVGATKMDRPED 495
                  *****999999**************************************99******99865544436669*************************** PP

       DUF839 355 ievnPttgevyvvltnnkkrdeski...dsanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedaka..asaessegndlespDnlafdpaG 447
                  ie++Pttg+vyv+ltnn++r++      d+anpr++nk+G++++l+e++++++at+f w+lfl+aGdped  +  a  ++++ + +++pDn+afd++G
  VIMSS244072 496 IEPSPTTGKVYVALTNNSNRGKAGYagpDEANPRNSNKHGHVLELTERWNRADATRFGWSLFLVAGDPEDPATyfAGFPKDRVSPISCPDNVAFDDHG 593
                  ******************9988444567******************************************999888899999**************** PP

       DUF839 448 rlwiatDgsgskdellgvtaeGkvynlarndGnn.vltsdaargevkrfltepegsEvtGvtfsPdgktlfvnvqhPg 524
                  +lwi+tDg++                l+++dG   v+t++++rge+k+flt p+g+E++G++++  +++++v+vqhPg
  VIMSS244072 594 NLWISTDGNA----------------LGSHDGLFgVATRGDRRGELKQFLTVPTGAETCGPLVQ--DRRVLVAVQHPG 653
                  *********9................5567777779****************************..99*********9 PP



Or compare VIMSS244072 to CDD or PaperBLAST