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Align VIMSS293875 to PF05787 (DUF839)

VIMSS293875 has 532 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.6e-124  402.9   0.0   9.5e-124  400.4   0.0    1.8  1  VIMSS293875  


Domain annotation for each sequence (and alignments):
>> VIMSS293875  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  400.4   0.0  9.5e-124  9.5e-124       2     524 .]      43     501 ..      42     501 .. 0.92

  Alignments for each domain:
  == domain 1  score: 400.4 bits;  conditional E-value: 9.5e-124
       DUF839   2 gfgplaaklddlvavpegyeakvlvrwGdklfagapefdqsaeaqekqvgynhDgmaffplsrsadeglLvvNhEytseeilf......ekekpspvt 93 
                  +f+ + ++++d++ +p gy+++ ++  Gdk+ ++ +           ++g n D+  ffpl+++++ glL++NhE   +  +       +k+ p+ +t
  VIMSS293875  43 KFQTVSPSEQDALILPSGYQYNTIALYGDKINPQGD-----------TFGFNSDFNCFFPLEGKKNAGLLWNNHETLGTLEYYvngydsQKQGPNLRT 129
                  5889999************************99965...........56**************************98877766789998999999*** PP

       DUF839  94 aelvekelaalGvtvveisrkagkwqvvrdsklnrritantemrlsGPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfggee 191
                   ++ e+ l+alG++v++i +k+g+w  + dsk++rri+  t++rl+GPaags+ +      + + ++GT+ NCagG T W t+L+cEEn++       
  VIMSS293875 130 DQQIEQYLYALGGSVIHIYKKKGEWILNPDSKYGRRIHGLTQFRLTGPAAGSAAVG-----NTNLVFGTFANCAGGLTFWNTVLSCEENVEWIIE--- 219
                  ****************************************************9887.....8999**************************7633... PP

       DUF839 192 avkadqkryGitgttgyerFdvanepkkfGyvvEvdpvdprstpvkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsndrvgtgnskan 289
                              +  +     ++    ++G+v+Evdp dp+s pvk+talGrf+HE+aa+v++  +++vvY+gdD r+e++YkFvs++ +++   ++n
  VIMSS293875 220 ------------P-CK-----LT-HETHYGWVIEVDPFDPKSVPVKHTALGRFAHENAALVLSPSGKLVVYMGDDARDEFVYKFVSKKSYDPSLGAKN 298
                  ............1.11.....22.34679********************************************************************* PP

       DUF839 290 saLldeGtLyvakfnedgtveWvplvegqg.glta...eng...fadqaevlvktrlaadkvGatkmdrpEdievnPttgevyvvltnnkkrdeskid 380
                  s Ll+eG+Lyva f++   ++W+pl+  ++  l++   eng   f+ qa+vlv+ r+aa+  Gat+mdrpEdie++P  g +++++tnn         
  VIMSS293875 299 STLLEEGILYVADFDK---GTWIPLDLETNeTLKNyktENGnrqFETQADVLVHCRAAAKICGATPMDRPEDIEIHPLDGTIFIAMTNND-------- 385
                  *************985...78****86533134445448887889********************************************8........ PP

       DUF839 381 sanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedakaasaessegndlespDnlafdpaGrlwiatDgsgskdellgvtaeGkvynlarnd 478
                      r+ n +Gqi+r++e+s+d+a+ +f +++f+  G                 +++pDnlafd++G+lw++tD s+++ +            + +++
  VIMSS293875 386 ----RHGNLFGQILRIREKSGDHAGLEFDFEVFIAGGA---------------RFAAPDNLAFDKEGNLWVVTDISAKNLN----------RSVYKKF 454
                  ....7899***************************996...............8***********************8876..........3445678 PP

       DUF839 479 Gnn.vltsdaargevkrfltepegsEvtGvtfsPdgktlfvnvqhPg 524
                  Gnn +++   ++g+  +f+ +p+g+E+tG  f+Pd+k lf++vqhPg
  VIMSS293875 455 GNNgLFVIRTDTGRAYQFASSPVGAELTGLWFTPDQKELFLSVQHPG 501
                  8888999999************************************9 PP



Or compare VIMSS293875 to CDD or PaperBLAST