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Align VIMSS333519 to PF05787 (DUF839)

VIMSS333519 has 638 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.6e-188  614.1   1.6   1.8e-188  613.9   1.6    1.0  1  VIMSS333519  


Domain annotation for each sequence (and alignments):
>> VIMSS333519  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  613.9   1.6  1.8e-188  1.8e-188       2     524 .]      64     605 ..      63     605 .. 0.96

  Alignments for each domain:
  == domain 1  score: 613.9 bits;  conditional E-value: 1.8e-188
       DUF839   2 gfgplaaklddlvavpegyeakvlvrwGdklfagapefd....qsaeaqekqvgynhDgmaffplsrsadeglLvvNhEytseeilfekekpspvtae 95 
                  gf+++   + d +++p+gy+  vl++wG++l a+ p+fd     +a+aqe q+g n+Dgm +fp+ +++d+ l+++N+Eyt+ ++lf ++  +p +ae
  VIMSS333519  64 GFESIPTATADSISLPKGYTSSVLISWGQPLQANGPAFDpsgkGTAQAQEVQFGDNNDGMCLFPMPGHKDRALMAINNEYTNYRYLF-DHGKEPQSAE 160
                  7999999**********************************9999*****************************************9.99999***** PP

       DUF839  96 lvekelaalGvtvveisrkagkwqvvrdsklnrritantemrlsGPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfgge.ea 192
                  +v+k+laa Gv+v+e+++k+gkwq+v+ds++nrr++ nt+++lsGPaag++ lkt ad+ g+++lGT++NC+ G+TpWGtyLtcEEnf++ fg++ ++
  VIMSS333519 161 EVQKALAAEGVSVIEVQQKQGKWQFVQDSRYNRRVHGNTPIKLSGPAAGHDWLKTDADKGGTHALGTFQNCSSGQTPWGTYLTCEENFTDCFGSSnPE 258
                  ******************************************************************************************99988543 PP

       DUF839 193 ..vkadqkryGit.gttgy......erFdva...nepkkfGyvvEvdpvdprstpvkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsn 278
                     +a +kryG+   +++        rFdva   ne +++G+vvE+dp dp+stpvkrtalGrfkHE+aa+  ++++r vvY+gdDer+e++YkF+s+
  VIMSS333519 259 qkFDAGMKRYGVVaASKEInwhphdPRFDVAknpNEVNRHGWVVEIDPFDPKSTPVKRTALGRFKHENAAFTQTKGGRAVVYMGDDERGEFIYKFISR 356
                  5788999*****955555599***************************************************************************** PP

       DUF839 279 drvgtgnskansaLldeGtLyvakfned........gtveWvplvegqggltaengfadqaevlvktrlaadkvGatkmdrpEdievnPttgevyvvl 368
                  d+++++n kan++Lld+GtLyva+f++         g+++W++l++g++gl+a + f++qaevl+++rlaa+ v at+mdrpE+i v+P+ g+vy++l
  VIMSS333519 357 DKIDHQNPKANRDLLDHGTLYVAQFDAGdsnpdhpkGKGQWIELTHGKNGLDAAASFNNQAEVLIHARLAASVVKATRMDRPEWIVVSPKDGQVYCTL 454
                  *************************99889******************************************************************** PP

       DUF839 369 tnnkkrde..skidsanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedaka....asaessegndlespDnlafdpaGrlwiatDgsgskd 460
                  tnn kr++  +++   nprakn+yGqi+r+ ee  +++a  f wdlf++aG+p+++       s +++++n+++spD+l fd+aGrlwi+tDg++s++
  VIMSS333519 455 TNNIKRGDegQPVGGPNPRAKNQYGQILRWSEEGSNASAMAFDWDLFVVAGNPAVHAGtpqaGSSNINAQNMFNSPDGLSFDEAGRLWIQTDGDSSNK 552
                  ****9987789********************************************988888889999****************************875 PP

       DUF839 461 ellgvtaeGkvynlarndGnn.vltsdaargevkrfltepegsEvtGvtfsPdgktlfvnvqhPg 524
                               +a   Gnn +l++d+a ge++rfl +p+g+E+tG+ f Pd kt+f+++qhPg
  VIMSS333519 553 G-----------DFA-GMGNNqMLCADPASGEIRRFLVGPVGCEITGISFAPDYKTMFIGIQHPG 605
                  4...........455.558888******************************************9 PP



Or compare VIMSS333519 to CDD or PaperBLAST