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Align VIMSS3627795 to PF05787 (DUF839)

VIMSS3627795 has 699 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-22   66.8   0.1    1.9e-22   66.1   0.1    1.3  1  VIMSS3627795  


Domain annotation for each sequence (and alignments):
>> VIMSS3627795  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.1   1.9e-22   1.9e-22     141     524 .]     184     643 ..     161     643 .. 0.78

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 1.9e-22
        DUF839 141 PaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfgge.eavkadqkryGitgttgyerFdvanepkkfGyvvEvdpvdp.rstp 235
                   P  g+  l   ++ +  ++ G    C    +pWGt L+ EE + + f ++  ++ ++ k +    ++ y   ++a +p ++G+  E+  +   + + 
  VIMSS3627795 184 PKTGHLTLIKYHNVDTSSAHGLWITCGASLSPWGTHLSSEEYEPDAFDQKlGQSLSTLKAFS---KNIYGDENIA-NPYNYGHLPEITVNADgTGRV 276
                   556666666677788889999999********************988855444333333333...3333333444.89**********999878999 PP

        DUF839 236 vkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsndrvgtgnskansaLldeGtLyvakfned......gtveWvplveg......... 317
                   +k+  lGr++HE ++v    +    v +gdD  ++ l+ Fv+ ++ +          l  GtLyvak+         g++ W+ l ++         
  VIMSS3627795 277 TKHYCLGRISHELVQV---FPDNRTVLMGDDYTNGGLFMFVADKEKD----------LSAGTLYVAKYTTVlsdtttGQISWIRLGHAtsaeienli 360
                   9***************...555555679**************99933..........578********999999999********999********* PP

        DUF839 318 ..............................................................................qggltaengfadqaevlvk 336
                                                                                                   +l++++  ++ a+  ++
  VIMSS3627795 361 ksgikgtdifesvlqiakypsdatiaekeaidagdkgtpeqqalakaakerlklqqaaqkaeleaqgfkftylsktgvYLKLKDNSDRTKLAAAFLE 457
                   *************************************************************************997665566667778888888889 PP

        DUF839 337 trlaadkvGatk.mdrpEdievnPttgevyvvltnnkkrde....skidsanpr.aknkyGqivrlieesrdvaatkftwdlfllaGdpedaka... 424
                   t + a+ +Ga + + + E+  vn   +++y +l n   +        + + n++ +k  +G i++ + +  + ++ +++ +   + ++++   +   
  VIMSS3627795 458 THRYAAYMGASMaLTKNEGTTVNIADKKAYSALANIVDSMVeggsGYLAEHNVKfPKITAGGILEHTLTGSQKDSSNVAINSEWVPSQSNLLIKgkd 554
                   988888899976269*******************99844224454445777777467799***9988777766666655555444444332222345 PP

        DUF839 425 ....asaessegndlespDnlafdpaGr.lwiatDgsgskdellgvtaeGkvynlarndGnnvltsdaargevkrfltepegsEvtGvtfsPd..gk 514
                          ++ + ++++spDnl f+++ r l i +D  ++ ++          +         + + + ++++++r+l  p g+E tG  +  +  g 
  VIMSS3627795 555 isfdSLGNTADPEQIASPDNLKFSEKLRtLFIGEDSGNHLNN----------F---------LWAYNVDTKQLIRILSTPAGAESTGLHAVDEvnGW 632
                   555456677778999********9875438888888774333..........2.........33445577788888888888888887654321133 PP

        DUF839 515 tlfv.nvqhPg 524
                   t ++ n qhPg
  VIMSS3627795 633 TYIMsNFQHPG 643
                   44333566665 PP



Or compare VIMSS3627795 to CDD or PaperBLAST