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Align VIMSS55390 to PF05787 (DUF839)

VIMSS55390 has 624 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   5.2e-215  701.5   6.7     6e-215  701.3   6.7    1.0  1  VIMSS55390  


Domain annotation for each sequence (and alignments):
>> VIMSS55390  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  701.3   6.7    6e-215    6e-215       2     524 .]      56     591 ..      55     591 .. 0.98

  Alignments for each domain:
  == domain 1  score: 701.3 bits;  conditional E-value: 6e-215
      DUF839   2 gfgplaaklddlvavpegyeakvlvrwGdklfagapefd....qsaeaqekqvgynhDgmaffplsrsadeglLvvNhEytseeilfekekpspvtael 96 
                 +f+++ ++++d+v vp+gy+a++l++wGd++fa+apefd    q+++aqekq+g n+Dgm+ffp+  s+d+g+L++N+Eyt+ e+lf +++++++ta++
  VIMSS55390  56 NFSAIPVSTEDKVIVPKGYKATPLMSWGDPIFANAPEFDqsgkQDSKAQEKQFGDNTDGMSFFPI--SEDRGVLAINNEYTNYEYLF-DHQGKAMTADD 151
                 79999***********************************99999********************..7******************9.9********** PP

      DUF839  97 vekelaalGvtvveisrkagkwqvvrdsklnrritantemrlsGPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfggeea..v 193
                 v+k++aa+Gvt+ve+ rk+g+w+v+r++++nrrita+t+m+++GPaag++llkt++d++g k+lGT+nNCa+G TpWGtyLtcEEnf+++fg++++  v
  VIMSS55390 152 VRKAQAAVGVTIVEVVRKNGQWMVDRQGERNRRITAYTPMMMTGPAAGHDLLKTAEDPSGLKVLGTFNNCANGETPWGTYLTCEENFDDFFGADQEgsV 250
                 ********************************************************************************************995558* PP

      DUF839 194 kadqkryGit.gttgy......erFdva...nepkkfGyvvEvdpvdprstpvkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsndrvg 282
                 +adqkryGi+ + ++y      +rFd++   +ep++fG+vvE+dp++p+stp krtalGrfkHE+aa+v+++d++vvvYlgdDer+e+lYkFvs++r++
  VIMSS55390 251 DADQKRYGIAaEPSDYqwhkhdARFDITknpKEPNRFGWVVEIDPHNPNSTPLKRTALGRFKHENAALVINNDGHVVVYLGDDERGEHLYKFVSKHRYQ 349
                 *****************************9********************************************************************* PP

      DUF839 283 tgnskansaLldeGtLyvakfned.....gtveWvplvegqggltaengfadqaevlvktrlaadkvGatkmdrpEdievnPttgevyvvltnnkkrde 376
                 +gn+++n++Ll+eGtLyvakf+ +     g+++W++l++g++glt+engf+dqaevl+++r+aa++vGat+mdrpE+++v+P++++v+++ltnnk+r++
  VIMSS55390 350 AGNDQQNRNLLEEGTLYVAKFDINenelkGSGRWMELSFGKNGLTPENGFKDQAEVLIFARRAATQVGATTMDRPEWVAVHPDKKHVFCTLTNNKNRGK 448
                 *********************99999*********************************************************************9988 PP

      DUF839 377 ..skidsanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedaka....asaessegndlespDnlafdpaGrlwiatDgsgskdellgvtaeG 469
                   +++   npr+kn+yGqivr++++++d++++ f+wdl+l aG+p+++k      s+++s++n+++spD++ fd+aGrlwi+tDg+ s++         
  VIMSS55390 449 egQPVGGPNPREKNNYGQIVRWMPAQGDHTSDVFAWDLYLIAGNPTVHKGtlyaGSENISADNMFNSPDGIGFDTAGRLWIQTDGNYSNQG-------- 539
                 889**********************************************999999999*****************************9876........ PP

      DUF839 470 kvynlarndGnn.vltsdaargevkrfltepegsEvtGvtfsPdgktlfvnvqhPg 524
                     +a  +Gnn +l+ d+ +gevkrflt+p  +E+tG tfsPd+kt+fv+vqhPg
  VIMSS55390 540 ---DFA-GQGNNqMLCGDPITGEVKRFLTGPIACEITGLTFSPDHKTMFVGVQHPG 591
                 ...676.779999******************************************9 PP



Or compare VIMSS55390 to CDD or PaperBLAST