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Align VIMSS59085 to PF05787 (DUF839)

VIMSS59085 has 672 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
   2.6e-200  653.0   0.0     3e-200  652.8   0.0    1.0  1  VIMSS59085  


Domain annotation for each sequence (and alignments):
>> VIMSS59085  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  652.8   0.0    3e-200    3e-200       2     524 .]      85     636 ..      84     636 .. 0.98

  Alignments for each domain:
  == domain 1  score: 652.8 bits;  conditional E-value: 3e-200
      DUF839   2 gfgplaaklddlvavpegyeakvlvrwGdklfagapefd....qsaeaqekqvgynhDgmaffpls........rsadeglLvvNhEytseeilf.... 84 
                  f+++a+ + d+++vp+gy+a++++ wG++++ ++p f+    +sa++q++q+g++hDgm+ffp++        + +++glLv+NhEy+++++l+    
  VIMSS59085  85 PFEAIASGRADTIRVPAGYKATPFIPWGTPISGSYPGFLddasNSAQDQAEQIGMHHDGMHFFPIDaqfgfgggHISNHGLLVLNHEYIDAPLLHtngp 183
                 6899**********************************999*9******************************999*******************9999 PP

      DUF839  85 ekekpspvtaelvekelaalGvtvveisrk.agkwqvvrdsklnrritantemrlsGPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEn 182
                 + ++++++ a++v+ke++a+Gv+vvei+r+ +g+w+vv  s++nrrita+t+mr++GPa+g+ell+t+++++g+++ GT+nNC++G+TpWGtyLtcEEn
  VIMSS59085 184 TVVDGKRTVADEVRKEINAHGVSVVEIRRNvRGEWNVV-PSQRNRRITAATPMRIAGPARGHELLRTRHSPDGTRTRGTHNNCSNGFTPWGTYLTCEEN 281
                 999***********************************.7888******************************************************** PP

      DUF839 183 fngyfgge.eavkadqkryGitgttgy..........erFdva...........nepkkfGyvvEvdpvdprstpvkrtalGrfkHEaaavvveddkr. 258
                 + gyf+++  +++++ +ryGi++t+++          erFd++           nep++fG++vE+dp dp+s pvkrtalGrf+HE+++++  +++r 
  VIMSS59085 282 WVGYFSTQdSELPRELTRYGIRNTSRFgwetlagdefERFDATrkgkqaqddyrNEPNNFGWIVEIDPFDPQSVPVKRTALGRFAHEGLVFAPVKPGRq 380
                 ********5669******************************99************************************************9999988 PP

      DUF839 259 vvvYlgdDerkeylYkFvsndrvgtgnskansaLldeGtLyvakfnedgtveWvplvegqgglta...eng..fadqaevlvktrlaadkvGatkmdrp 352
                 vv+Y+gdD+++ey+Yk+vs+d++++g  ++n++LldeGtLyva+fn+dg+++W+pl+ ++g+++a   ++g  fadq+evl++trlaad +Gatkmdrp
  VIMSS59085 381 VVCYSGDDSQNEYIYKYVSRDKFRPG--RSNTRLLDEGTLYVARFNADGSGQWLPLDIADGNFRAacrKAGvsFADQGEVLINTRLAADVLGATKMDRP 477
                 99**********************99..79***********************************99877788************************** PP

      DUF839 353 EdievnPttgevyvvltnnkkrdeskidsanpraknkyGqivrlieesrdvaatkftwdlfllaGdpedaka.asaessegndlespDnlafdpaGrlw 450
                 E+ +vnP++g+vy++ltnn++r  + +d+anpr kn+yG+i+r++e+srd+a+++ftwdlf+laG+ ed++  + ++ +++n+l+spD+l+fdp+Grlw
  VIMSS59085 478 EWGAVNPDNGDVYFTLTNNTSR--TVADAANPRVKNAYGHIIRWRERSRDYAGQRFTWDLFMLAGPGEDSRGpDGKPLNQDNILASPDGLWFDPEGRLW 574
                 ********************88..999*******************************************999************************** PP

      DUF839 451 iatDgsgskdellgvtaeGkvynlarndGnn.vltsdaargevkrfltepegsEvtGvtfsPdgktlfvnvqhPg 524
                 i+tD+sgs+ +             ++++Gnn +l++d+++ge+krflt+p g+EvtG++++Pd +tlf+n+qhPg
  VIMSS59085 575 IQTDMSGSQLS-------------SGPFGNNqMLVADPRTGELKRFLTGPLGCEVTGIAATPDFRTLFINIQHPG 636
                 *******9876.............7899**********************************************9 PP



Or compare VIMSS59085 to CDD or PaperBLAST