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Align VIMSS5923392 to PF05787 (DUF839)

VIMSS5923392 has 654 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-26   80.1   0.7    1.5e-26   79.6   0.7    1.2  1  VIMSS5923392  


Domain annotation for each sequence (and alignments):
>> VIMSS5923392  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.6   0.7   1.5e-26   1.5e-26     140     457 ..     200     558 ..     150     606 .. 0.77

  Alignments for each domain:
  == domain 1  score: 79.6 bits;  conditional E-value: 1.5e-26
        DUF839 140 GPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfngyfgge.eavkadqkryGitgttgyerFdva..nepkkfGyvvEvdpvdp.r 232
                    Pa g   +   ++ +  k+ G    C    +pWGt L+ EE + + + +  +a  +   +          +F+ +   +p ++G+  E+  +   +
  VIMSS5923392 200 DPATGALKVVKYHNVDTSKAHGLWITCGASLSPWGTHLSSEEYEPDATKAAtDAQFKAFSKN---------TFGDEtkANPYHYGHLPEITVNPDgT 287
                   588887666668889999**************************996443324433333333.........33333236799********9877678 PP

        DUF839 233 stpvkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsndrvgtgnskansaLldeGtLyvakfned.......gtveWvplveg..... 317
                    t +k+  lGr++HE ++v    + +  v +gdD  ++ l+ Fv+ ++ +          l  GtLyvak  ++        t++W+ + ++     
  VIMSS5923392 288 GTVKKHYCLGRISHELIQV---MPDQRTVMMGDDATNGGLFMFVADKAAD----------LSAGTLYVAKWTQTssagagtATLTWIKIGHAtsgei 371
                   8999***************...666777789***************9955..........679**********99****99999*****9999**** PP

        DUF839 318 .................................qggltaengfadqaevlvktrlaadkvGatkmdrpEdievnPttgevyvvltnnkkrde..ski 379
                                                     + ++ + g++++a+ l  +r aa   G + + ++E+  vn + + vy +++  +++    + +
  VIMSS5923392 372 etlantlkasdimdlvttdpndasytkihfggkFNWMRVKPGMEKAAAFLETHRYAALLGGSMAFTKLEGTTVNAKDKIVYTAMSRIETSMVkgNAV 468
                   *********************99999999866333334488899999999999999999999**********************9987432232333 PP

        DUF839 380 .dsanpraknkyGqivrlieesr..dvaatk..ftwdlf......llaGdpedakaasaessegndlespDnlafdpaGr.lwiatDgsg 457
                     +  + +k ++G+++ l  + +  d+++     +w  +      +l G++ +a +a  +  + +++++pDnl f+++ r l i +D   
  VIMSS5923392 469 sRDVAVDKKIAAGAVYALNLKAGqrDTTGGAidSEWVPVdmgapaALVGEDLAAADALGNLANPDKIANPDNLKFSEKLRtLFIGEDSGM 558
                   466777888899***988765541155544311344322111111445555555558888999999*******99987432777777655 PP



Or compare VIMSS5923392 to CDD or PaperBLAST