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Align VIMSS954467 to PF05787 (DUF839)

VIMSS954467 has 709 amino acids

Query:       DUF839  [M=524]
Accession:   PF05787.13
Description: Bacterial protein of unknown function (DUF839)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.8e-20   58.5   0.2      8e-20   57.4   0.2    1.5  1  VIMSS954467  


Domain annotation for each sequence (and alignments):
>> VIMSS954467  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   0.2     8e-20     8e-20     140     458 ..     259     614 ..     222     664 .. 0.72

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 8e-20
       DUF839 140 GPaagsellktsadaegvkilGTanNCagGtTpWGtyLtcEEnfng...yfggeeavkadqkryGitgttgyerFdvanepkkfGyvvEvdpvdp.rs 233
                   Pa g+ +l   ++ + + + G  + C    +pW t L+ EE + +    +g+++  + +++ yG  +  +        +p ++G+  E+  +   + 
  VIMSS954467 259 DPATGKLSLVKYHNVDTAPVHGLWTTCGASLSPWNTHLSSEEYEPDataLAGNTQFRSYSTHLYGDPE--K-------ANPYHYGHLPEITVHPDgTG 347
                  5899998888899999999************************9995533333233444444555222..2.......4699********99988688 PP

       DUF839 234 tpvkrtalGrfkHEaaavvveddkrvvvYlgdDerkeylYkFvsndrvgtgnskansaLldeGtLyvakfned.......gtveWvplveg....... 317
                  + +k+  lGr++HE ++v    + +  v +gdD  ++ l+ F++  + +          l  GtLyv k +++        t+ W+ l ++       
  VIMSS954467 348 SVRKHYCLGRISHELVQV---MPDQRTVLMGDDATNGGLFMFIADRKAD----------LSAGTLYVGKWHQTsgigpgaATLSWIKLGHAtsaeiqa 432
                  889***************...777777889*************999844..........679*****************9999999999999999999 PP

       DUF839 318 ............................qgglta...engfadqaevlvktrlaadkvGatkmdrpEdievnPttgevyvvltnnkkrdeskidsanp 384
                                              +g ++    + g++++a+ l  +r aa + G   + ++E+  vn + + +y++++   ++  +   s+++
  VIMSS954467 433 madrltaadildvhlsdpgdaaftkipfNGTFNWiriKPGMEKAATYLETHRYAALAGGSLGFTKLEGTTVNAHDKVAYMAMSYIVTS--MLNGSGDV 528
                  9999999999999999999999998888444444555888999999999999999999******************888887765533..11223333 PP

       DUF839 385 r.aknkyGqivrlieesr....dvaatkftwdlfllaGdpedaka......asaessegndlespDnlafdpa.GrlwiatDgsgs 458
                  + +  ++G+++ l  + +     +a  +  w  + +a + + + +      a  +  + + +++pDnl f+++   l i +D s +
  VIMSS954467 529 KvQGPEAGAVYALNLRGGqrdsHGAPIHSDWVPIDMAAPAALTGHnlakadALGNLADPERIANPDNLKFSESlRTLFIGEDSSLH 614
                  31223567776554333211112333445554443333322222233333356666777788888888887762346777777664 PP



Or compare VIMSS954467 to CDD or PaperBLAST