PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS15378 to PF05974 (DUF892)

VIMSS15378 has 166 amino acids

Query:       DUF892  [M=159]
Accession:   PF05974.12
Description: Domain of unknown function (DUF892)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.4e-59  184.7  14.2    7.2e-59  184.5  14.2    1.0  1  VIMSS15378  


Domain annotation for each sequence (and alignments):
>> VIMSS15378  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  184.5  14.2   7.2e-59   7.2e-59       1     159 []       5     163 ..       5     163 .. 0.98

  Alignments for each domain:
  == domain 1  score: 184.5 bits;  conditional E-value: 7.2e-59
                 ..HHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHT.T-------.-HHHHTTT-----------THHHHHHH. CS
      DUF892   1 tleelfvdeLrDlyaaEkqllkalpkmakaaespeLkaaleqHleeTegqierLeqvferl.gesasekkcdamegliaegqelieeaaedeslkdaal 98 
                 t+e++f++ L D+y+aEkql++al k+a+a ++++L++a+  HleeT+gqier++qv+e+  + + +++kc amegli+e++e+ie  +e+++++daal
  VIMSS15378   5 TIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESEsNLKIKRMKCVAMEGLIEEANEVIES-TEKNEVRDAAL 102
                 689*******************************************************986599**********************9.99999****** PP

                 ..HHHHHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH. CS
      DUF892  99 iaaaqavehyEiAsYgtLialAeqlgekeaaklLeqtleeekatdekltelaeslvnqeaa 159
                 iaaaq+vehyEiAsYgtL++lAeqlg+ +aaklL++tleeekatd klt+la + vn++a+
  VIMSS15378 103 IAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKKAE 163
                 *********************************************************9985 PP



Or compare VIMSS15378 to CDD or PaperBLAST