PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS162972 to PF05974 (DUF892)

VIMSS162972 has 183 amino acids

Query:       DUF892  [M=159]
Accession:   PF05974.16
Description: Domain of unknown function (DUF892)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-52  163.8   8.6    1.9e-52  163.6   8.6    1.0  1  VIMSS162972  


Domain annotation for each sequence (and alignments):
>> VIMSS162972  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  163.6   8.6   1.9e-52   1.9e-52       2     157 ..      16     171 ..      15     173 .. 0.98

  Alignments for each domain:
  == domain 1  score: 163.6 bits;  conditional E-value: 1.9e-52
       DUF892   2 leelfideLrDayaaEkqalkalpkmakaaespeLkaaleqHleeTeqqierleqvferlgeeasekkcdameglvaegqelleeaiedeevkdaali 99 
                  ++e fi+e   +y+aE+++++a ++m +++++++L++ +e+H++eTeqqi++leqvf++lg+++++++cda++glv++gq+l+  a+e++++++++l+
  VIMSS162972  16 FQEKFIYEVGAMYDAEHRFWEAQQTMLQCCQNSQLRSLIETHIRETEQQIRNLEQVFNALGQQPRRVTCDAAAGLVSDGQKLMLLASENQQILNLGLA 113
                  689**********************************************************************************9************ PP

       DUF892 100 aaaqavehyEiasYgtLialAeqlgeaeaaelLeqtldeEkatdekLtelaeelvnqe 157
                    + +ve++Eia+Y+ Li++Aeq+g++++++lL+q+l++E++t +k+++++++l++++
  VIMSS162972 114 GGQAKVEQLEIACYRGLIRAAEQMGQDQVVQLLRQNLQQEEQTSQKIEQHLPQLIQEA 171
                  ******************************************************9986 PP



Or compare VIMSS162972 to CDD or PaperBLAST