PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS58903 to PF06004 (DUF903)

VIMSS58903 has 73 amino acids

Query:       DUF903  [M=49]
Accession:   PF06004.16
Description: Bacterial protein of unknown function (DUF903)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      4e-24   70.6   0.2    4.5e-24   70.5   0.2    1.0  1  VIMSS58903  


Domain annotation for each sequence (and alignments):
>> VIMSS58903  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.5   0.2   4.5e-24   4.5e-24       1      48 [.      24      71 ..      24      72 .. 0.97

  Alignments for each domain:
  == domain 1  score: 70.5 bits;  conditional E-value: 4.5e-24
      DUF903  1 pyvitTkDGqtivtqgkPelDkdtGmyeYedeeGkevqInkddVkqIk 48
                p+++t++DG++i+++++P++D ++G+ye e+++Gk++++nkd+V++Ik
  VIMSS58903 24 PTIVTLNDGREIQAVDTPRYDRSSGFYELEQLDGKRTRVNKDQVRSIK 71
                679********************************************8 PP



Or compare VIMSS58903 to CDD or PaperBLAST