PaperBLAST – Find papers about a protein or its homologs

 

Align WP_002219310.1 to PF06074 (DUF935)

WP_002219310.1 has 522 amino acids

Query:       DUF935  [M=517]
Accession:   PF06074.16
Description: Protein of unknown function (DUF935)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.3e-186  606.6   0.5   2.8e-186  606.3   0.5    1.0  1  WP_002219310.1  


Domain annotation for each sequence (and alignments):
>> WP_002219310.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  606.3   0.5  2.8e-186  2.8e-186       7     515 ..       7     517 ..       2     519 .. 0.95

  Alignments for each domain:
  == domain 1  score: 606.3 bits;  conditional E-value: 2.8e-186
          DUF935   7 grpikeekaaleeqtaeatltgvrrelsehpssgLtparlarilreaeqGdilaqleLaedmEekdahlaselstRkravlgldwevepasd.da 100
                       +i++++aal++++a  ++t++ r+++ehps+ +tp+++++++++ae+Gdi+aq+eL++d+Ee+d+ +a++++tRkra+l+l+w+v+p+++ ++
  WP_002219310.1   7 KTKIQKPEAALQTDVA--QITATGRVIAEHPSNFITPQKMRALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNaTP 99 
                     4556666666555555..9**************************************************************************** PP

          DUF935 101 aeekladavrelledldnledllfdllDAigkGfsvlEieWetsggewvpkalewrdprwfqfdredrnelrlrdateegeelppfkfvvhrhka 195
                     +eekl d+  e++ +l++ledl++dl+DA+g+Gfs+lE+eW +s+g  +p+++ +r+++wf++d+++++ lr+r+++e ge+l+p ++vvh++k+
  WP_002219310.1 100 EEEKLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWFKWDKDNGLLLRTRENPE-GEALWPLGWVVHTQKS 193
                     *****************************************************************************9.**************** PP

          DUF935 196 ksglpiragllrvlaWpylfknyslkdwaeFlEvYGlPlrlGkYpagAseeeketLlravasigsdAaaiiPesmeiefkeaak..agssdlfea 288
                     +s + +r+gl+r+l+W+y+fk+y+++d+aeFlE YG+P+r+GkY+agA++eek+tLlrava+ig++Aa+i+Pe+meie+++aa+   ++s++f +
  WP_002219310.1 194 RSVQQARNGLFRTLSWLYMFKHYAVHDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAASgtMATSNPFLQ 288
                     ***********************************************************************************998899****** PP

          DUF935 289 laewcdkqiSkaiLGqTlTtdadg.gssnAlgkvhneVreDirdaDakqlaatlnrdlirplvalNfgs..qerlPrfefdveepeDlkalaeal 380
                     +a+wc+k+ +++iLGqTlT+ adg +s+nAlg++hneVr+D++++Dakq+a+t+++++i p++++N+ +   +r+P+fefd++ep+D++ +a+a+
  WP_002219310.1 289 MADWCEKSAARLILGQTLTSGADGkSSTNALGNIHNEVRRDLLVSDAKQVAQTITSQIIGPFLQINYPNadPNRVPKFEFDTREPKDIAVFADAI 383
                     *******************************************************************99999*********************** PP

          DUF935 381 ekLvklGlrvpasevrdklglpepekdeevlkaaaaaepeaaaapaalaaaaalaaqaaaeaaeqdalDaladealaes..qaalepllapvlel 473
                     +kLv++G+++p+s+vrdkl +p+ +++e+vl  +    p+++ +++alaa +a++  ++a+ ++q+ lD ++d al e   +++l+p++ + +++
  WP_002219310.1 384 PKLVDVGVQIPESWVRDKLVIPDVQEGEAVLVRQV---PDNPINRTALAALSAHTVPSKATGRHQEILDGALDDALVEPdfNSQLNPMVRQAVAA 475
                     ********************************333...333333334455334566889999999*******999999889************** PP

          DUF935 474 lqkaesleellarlaelypemdaeelaelLaralfvAdllGr 515
                     l++++s+ee+ a+l++lyp++d+++l  ++++alf++d+lG+
  WP_002219310.1 476 LNACNSYEEADAALNALYPNLDNAKLRTYMQQALFISDILGQ 517
                     *****************************************8 PP



Or compare WP_002219310.1 to CDD or PaperBLAST