PaperBLAST – Find papers about a protein or its homologs

 

Align CharProtDB::CH_124288 to PF06155 (DUF971)

CharProtDB::CH_124288 has 573 amino acids

Query:       DUF971  [M=85]
Accession:   PF06155.12
Description: Protein of unknown function (DUF971)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
      2e-14   40.4   0.0    5.5e-14   38.9   0.0    1.8  1  CharProtDB::CH_124288  


Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_124288  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.9   0.0   5.5e-14   5.5e-14       5      74 ..     185     260 ..     182     275 .. 0.85

  Alignments for each domain:
  == domain 1  score: 38.9 bits;  conditional E-value: 5.5e-14
                 DUF971   5 kkgkrLeiewddgkesslpaelLRdacpcaecrkp..gqrllqsgkipkdvkiesie.pvgnyalrlvfsDg...h 74 
                            + +++L ++++dg e+ l+  +LRd c+c  c+++  gq+ +++ ++p ++++ ++   ++ + +++v+ D+    
  CharProtDB::CH_124288 185 SGSRTLAVRFNDGLETPLSKLWLRDSCRCSACVDSssGQKNFETCDVPSSLRVRKVGvAADGESVQVVWGDDfltG 260
                            6789*****************************44469******************988999*********84440 PP



Or compare CharProtDB::CH_124288 to CDD or PaperBLAST