PaperBLAST – Find papers about a protein or its homologs

 

Align XP_002369798.1 to PF06155 (GBBH-like_N)

XP_002369798.1 has 644 amino acids

Query:       GBBH-like_N  [M=85]
Accession:   PF06155.16
Description: Gamma-butyrobetaine hydroxylase-like, N-terminal
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-09   24.3   0.1    5.1e-09   23.1   0.1    1.6  1  XP_002369798.1  


Domain annotation for each sequence (and alignments):
>> XP_002369798.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.1   0.1   5.1e-09   5.1e-09      21      77 ..     550     609 ..     545     611 .. 0.81

  Alignments for each domain:
  == domain 1  score: 23.1 bits;  conditional E-value: 5.1e-09
     GBBH-like_N  21 elpaewLRvacpcaecrgp...gqrllqtgkieedvkikeiepvgnyavrivfsDghdsg 77 
                     +++++  R+ac+c +c  +   +q   q+++ + +++++e+ ++ n  + +v++Dgh++ 
  XP_002369798.1 550 TISLRRIRDACQCKSCAAEvrrDQLSGQNARNSGELALTEVLHASNRSLIFVWDDGHRTA 609
                     688999***********4443344445555577889*********************986 PP



Or compare XP_002369798.1 to CDD or PaperBLAST