biolip::6npbB has 378 amino acids
Query: GBBH-like_N [M=85]
Accession: PF06155.16
Description: Gamma-butyrobetaine hydroxylase-like, N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-12 33.8 0.0 6.4e-12 32.4 0.0 1.8 2 biolip::6npbB
Domain annotation for each sequence (and alignments):
>> biolip::6npbB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.4 0.0 6.4e-12 6.4e-12 5 84 .. 11 91 .. 7 92 .. 0.90
2 ? -2.8 0.0 0.62 0.62 2 19 .. 275 292 .. 274 298 .. 0.76
Alignments for each domain:
== domain 1 score: 32.4 bits; conditional E-value: 6.4e-12
GBBH-like_N 5 kdsrkLeiewddgktselpaewLRvacpcaecrgp..gqrllqtgkieedvkikeiepvgnyavrivfsDghdsgiYsweyL 84
+++ L+++++dg++s+++a+wLR++ +e r+p gqrl+ g i++d++i + v++ a++++f + ++ ++ ++L
biolip::6npbB 11 ASGSFLTLTFEDGSESRFHAIWLRDNALDPETRSPgnGQRLITIGDIPADTRISTAL-VDDGALTVTFAPEGKTVTFPGKWL 91
567889***************************6666****************9998.9*********99999988988887 PP
== domain 2 score: -2.8 bits; conditional E-value: 0.62
GBBH-like_N 2 rlkkdsrkLeiewddgkt 19
+l+ d++ + i+++++++
biolip::6npbB 275 ELSPDGEMIAIRFNNRSS 292
678888899999988765 PP
Or compare biolip::6npbB to CDD or PaperBLAST