PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001396459.1 to PF06500 (FrsA-like)

XP_001396459.1 has 406 amino acids

Query:       FrsA-like  [M=414]
Accession:   PF06500.15
Description: Esterase FrsA-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-12   32.7   0.0    2.7e-12   32.2   0.0    1.1  1  XP_001396459.1  


Domain annotation for each sequence (and alignments):
>> XP_001396459.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.2   0.0   2.7e-12   2.7e-12      95     288 ..      47     249 ..      40     272 .. 0.80

  Alignments for each domain:
  == domain 1  score: 32.2 bits;  conditional E-value: 2.7e-12
       FrsA-like  95 Gnwiyewaklgmlhqkka...aeekdeqeaadellaaallysiaayphlkn...delaeqaqvlanrayeeaakklpytlkqlefsvqdgkkiag 183
                      +w+ ew + +     +a      k+ ++a + +l+a++++  a +    n   de+++     ++ ++ +a +  ++    + +++++ +++ g
  XP_001396459.1  47 EDWVREWRNAAERAVSNAdhsKTAKNSESAYHGYLRASNYFRTAEFYRRENvneDEISQSLFESSESSFVKAMEVSEFCYEPISIPYEE-TSLPG 140
                     46*****887655554441104455566777889**********99765551115666555556889999*******************.78877 PP

       FrsA-like 184 f.lhlpktdaplpvvlvsaGldslqtdyyrlfrdylapkdiamltidlpsvGassk...wkltedssllhqavlkaladvpwvdhtrvalvGfrf 274
                     + + + +td+pl +++  +G+ds  ++ +         ++   l+ d p  Ga+ +    ++ +d   +   v++   + p ++ + + l+G+ +
  XP_001396459.1 141 YfVRFDRTDKPLRTIIFNGGFDSTASEGWFAIGAAALARGYNFLAFDGPGQGAAIRsqgMHFRHDWEKVLTPVVNYAISRPEINANGIVLFGWSM 235
                     5278999**********************999999999**************96552226788999999999*********************** PP

       FrsA-like 275 Ganvavrlaylese 288
                     G+  ++r a  e+ 
  XP_001396459.1 236 GGYLVARAATQEHR 249
                     *******9976653 PP



Or compare XP_001396459.1 to CDD or PaperBLAST