PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::4i4cA to PF06500 (FrsA-like)

biolip::4i4cA has 402 amino acids

Query:       FrsA-like  [M=414]
Accession:   PF06500.15
Description: Esterase FrsA-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   5.5e-209  680.0   1.9   6.2e-209  679.8   1.9    1.0  1  biolip::4i4cA  


Domain annotation for each sequence (and alignments):
>> biolip::4i4cA  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  679.8   1.9  6.2e-209  6.2e-209      11     413 ..       1     400 [.       1     401 [. 0.99

  Alignments for each domain:
  == domain 1  score: 679.8 bits;  conditional E-value: 6.2e-209
      FrsA-like  11 fkkkkkaketstlvrrlpsskvveildaldeqtakawyrmlrrlqwiwrGidpleieevlariasskaertddelldtvvGyrsGnwiyewaklgm 106
                    f+k+k+akets+l++++p+s+  ++ld+ +e++  +wyr+lrrlqw+w+G+dp+e+e+vlariassk++rtd+++ldtv+Gy+sGnw yew++lgm
  biolip::4i4cA   1 FVKHKQAKETSALTQYMPTSQ--SLLDEIKEKNGFSWYRNLRRLQWVWQGVDPIEQEQVLARIASSKHSRTDEQWLDTVMGYHSGNWAYEWTRLGM 94 
                    899******************..9************************************************************************ PP

      FrsA-like 107 lhqkkaaeekdeqeaadellaaallysiaayphlkndelaeqaqvlanrayeeaakklpytlkqlefsvqdgkkiagflhlpktdaplpvvlvsaG 202
                    +hqk+a e ++e  a++ l++a+l+ysia+yphlk+d+la qaqvlan ay eaakk +y++kqle+++++  ki+++lhl +td+p pvv+vsaG
  biolip::4i4cA  95 EHQKRAGEMTNE-AASEALFSASLCYSIAGYPHLKSDNLAIQAQVLANSAYLEAAKKSKYIIKQLEIPFEK-GKITAHLHLTNTDKPHPVVIVSAG 188
                    ***********9.999*******************************************************.79********************** PP

      FrsA-like 203 ldslqtdyyrlfrdylapkdiamltidlpsvGasskwkltedssllhqavlkaladvpwvdhtrvalvGfrfGanvavrlaylesekvkavvalGa 298
                    ldslqtd++rlfrd+la++diamlt+d+psvG+ssk++lted s lhqavl++l ++p+vdh+rv+l+GfrfG+n++vrl++le+ek+ka+v lGa
  biolip::4i4cA 189 LDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGA 284
                    ************************************************************************************************ PP

      FrsA-like 299 vvhdlltsskklqkvpkmyldvlasrlGkadvdveslagelnayslkvqGll.grrtktpilalslendpvspkednklvalssadGklkkikskt 393
                    ++hd+++s++klq++pkmyldvlasrlGk++vd+ sl+g++ a+slkvqG+l +r+tk+pila+sle+dpvsp++dn++va +s++Gk+kki+skt
  biolip::4i4cA 285 PIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLsSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKT 380
                    ****************************************************99****************************************** PP

      FrsA-like 394 iyknyeksldlaiewledkl 413
                    i+++ye+sldlai+wled+l
  biolip::4i4cA 381 ITQGYEQSLDLAIKWLEDEL 400
                    ******************98 PP



Or compare biolip::4i4cA to CDD or PaperBLAST