PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS55058 to PF06526 (DUF1107)

VIMSS55058 has 77 amino acids

Query:       DUF1107  [M=63]
Accession:   PF06526.16
Description: Protein of unknown function (DUF1107)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-31   94.7   0.9    1.5e-31   94.5   0.9    1.0  1  VIMSS55058  


Domain annotation for each sequence (and alignments):
>> VIMSS55058  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.5   0.9   1.5e-31   1.5e-31       1      63 []      10      72 ..      10      72 .. 0.99

  Alignments for each domain:
  == domain 1  score: 94.5 bits;  conditional E-value: 1.5e-31
     DUF1107  1 mriFkkYaPlqIAkyvktffkGrlyikglGrfeFdkGrlllpkkadkkvlkvvseiNeeikel 63
                mr Fk+Y P +IAk+v+++fkGr+yi g+G+feFd+G+l lp+kad++++++v+e+N+ei +l
  VIMSS55058 10 MRLFKRYTPGMIAKHVSRLFKGRIYIFGVGKFEFDNGKLKLPEKADQRHYQTVKEVNQEIMKL 72
                9***********************************************************986 PP



Or compare VIMSS55058 to CDD or PaperBLAST