VIMSS5784014 has 228 amino acids
Query: DUF1120 [M=116]
Accession: PF06551.16
Description: Protein of unknown function (DUF1120)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-10 27.2 0.9 2.8e-10 26.6 0.4 1.7 2 VIMSS5784014
Domain annotation for each sequence (and alignments):
>> VIMSS5784014
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.6 0.4 2.8e-10 2.8e-10 1 92 [. 27 115 .. 27 149 .. 0.85
2 ? -2.0 0.0 0.21 0.21 91 114 .. 164 188 .. 132 190 .. 0.51
Alignments for each domain:
== domain 1 score: 26.6 bits; conditional E-value: 2.8e-10
DUF1120 1 lkvtGeltagaCtPvlsgGG.vvdyGtkavsaLsatklnqlGtkditltitCeaatkiavtakDnradsivalkdssgqakvldiknallggs 92
lk+ G++t+ +Ct + ++dyG ++ s + a++ lG k +++i+C a+ +++ + D+ + s ds ++ +v+ + na+++++
VIMSS5784014 27 LKINGDITPPTCTVNAGDNDiIIDYGVISPSFIPAEENYALGAKSANIKISCDASNYLTLKVSDTYKTS---STDSAKI-SVFGLVNAKNTEQ 115
799**********9998766268*****************************************99988...4555554.4445556655555 PP
== domain 2 score: -2.0 bits; conditional E-value: 0.21
DUF1120 91 gsivkqttrafGlGktkdg.kkiGa 114
+ +v + + ++ Gk + ++iGa
VIMSS5784014 164 QAQVDKNNLKLIAGKVFNAkIQIGA 188
3333334444444554443135555 PP
Or compare VIMSS5784014 to CDD or PaperBLAST