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Align NP_079460.2 to PF06565 (DUF1126)

NP_079460.2 has 749 amino acids

Query:       DUF1126  [M=105]
Accession:   PF06565.12
Description: DUF1126 PH-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.2e-101  320.0   4.2    1.1e-34  104.7   0.1    4.3  4  NP_079460.2  


Domain annotation for each sequence (and alignments):
>> NP_079460.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.5   0.3   5.3e-34   5.3e-34       2     105 .]      69     174 ..      68     174 .. 0.94
   2 !   83.4   0.0   4.7e-28   4.7e-28       1      93 [.     219     308 ..     219     318 .. 0.92
   3 !   28.1   0.0   7.6e-11   7.6e-11      58     105 .]     317     360 ..     312     360 .. 0.89
   4 !  104.7   0.1   1.1e-34   1.1e-34       1     105 []     419     530 ..     419     530 .. 0.93

  Alignments for each domain:
  == domain 1  score: 102.5 bits;  conditional E-value: 5.3e-34
      DUF1126   2 kkflendrkvLrFyalwddk.resleeeer..kfvisyyleDdtieikEprqrNsGikggkflkRqklpkpeeeakgeyytpkdlnvgatvnvfgrkf 96 
                  + ++++d++vL+F+a+++++  ++++ ++r  +++i++y eDdti+++Ep+++NsG+ +g+ ++R+++  p ++ + ++yt  ++nvg++v ++gr+f
  NP_079460.2  69 PSWVAFDKQVLSFDAYLEEEvLDKSQTNYRirYYKIYFYPEDDTIQVNEPEVKNSGLLQGTSIRRHRITLPPPD-EDQFYTVYHFNVGTEVVFYGRTF 165
                  789******************77888888888************************99**********996655.789******************** PP

      DUF1126  97 llldcdeft 105
                   ++dcd+ft
  NP_079460.2 166 KIYDCDAFT 174
                  ********8 PP

  == domain 2  score: 83.4 bits;  conditional E-value: 4.7e-28
      DUF1126   1 lkkflendrkvLrFyalwddkresleeeerkfvisyyleDdtieikEprqrNsG..ikggkflkRqklpkpeeeakgeyytpkdlnvgatvnvfg 93 
                  lk+fl++++k+L+F++lwdd + s+++++r+++++y+l+DdtieikE  ++ sG      +fl+R+klpk ++  ++++y+p +++ +a++n +g
  NP_079460.2 219 LKQFLQYHGKILCFFCLWDD-SVSMFGDRRELILHYFLCDDTIEIKELLPHSSGrdA-LKMFLRRSKLPK-NC--PPRVYQPGQITDRAVLNSYG 308
                  589*****************.7********************************853.79**********.33..58***************998 PP

  == domain 3  score: 28.1 bits;  conditional E-value: 7.6e-11
      DUF1126  58 gkflkRqklpkpeeeakgeyytpkdlnvgatvnvfgrkfllldcdeft 105
                  g ++ R kl k     ++e+y+ +dl +g t+nv+grk+ll+dcdeft
  NP_079460.2 317 GYLFDRYKLGK--V--DQEFYKDSDLSLGVTINVWGRKVLLYDCDEFT 360
                  77888999988..3..379****************************8 PP

  == domain 4  score: 104.7 bits;  conditional E-value: 1.1e-34
      DUF1126   1 lkkflendrk.....vLrFyalwddkresleeeerkfvisyyleDdtieikEprqrNsGikggkflkRqklpkpeeea....kgeyytpkdlnvgatv 89 
                  +kkf+e+d+      +LrF+a++ ++  ++ + +r fvisyyl Ddti+++Ep +rNsGi+gg+flkR++++kp++e      +ey+++++l++g tv
  NP_079460.2 419 FKKFMEKDSYgsksnILRFFAKLVTD--KCVDLDRMFVISYYLGDDTISVFEPIERNSGIAGGMFLKRSRVKKPGQEVfkseLSEYIKAEELYIGVTV 514
                  578888876666777**********7..9********************************************999889887788************* PP

      DUF1126  90 nvfgrkfllldcdeft 105
                  nv+g  f+ll++de+t
  NP_079460.2 515 NVNGYLFRLLNADEYT 530
                  **************98 PP



Or compare NP_079460.2 to CDD or PaperBLAST