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Align XP_001704987.1 to PF06565 (DUF1126)

XP_001704987.1 has 647 amino acids

Query:       DUF1126  [M=105]
Accession:   PF06565.12
Description: DUF1126 PH-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-84  265.1   1.6    2.4e-38  116.5   0.1    3.2  3  XP_001704987.1  


Domain annotation for each sequence (and alignments):
>> XP_001704987.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.3   0.1   5.8e-29   5.8e-29       4     105 .]     153     257 ..     150     257 .. 0.89
   2 !  116.5   0.1   2.4e-38   2.4e-38       2     105 .]     312     423 ..     311     423 .. 0.93
   3 !   60.3   0.0   7.1e-21   7.1e-21       3     105 .]     505     623 ..     503     623 .. 0.86

  Alignments for each domain:
  == domain 1  score: 86.3 bits;  conditional E-value: 5.8e-29
         DUF1126   4 flendrkvLrFyalwddk.resleeeer..kfvisyyleDdtieikEprqrNsGikggkflkRqklpkpeeeakgeyytpkdlnvgatvnvfgrk 95 
                     +   dr v+rF+a + ++  es+ e++r  ++ i yyl+D ti+i+E +++NsGi++g ++kR+++p+ + +a+  +++ +dl+vg  v+++++ 
  XP_001704987.1 153 HAVLDRVVMRFFAWFMEDvFESQSEKRRirHVFIDYYLADRTIQIQERPVKNSGIPQGDLVKRHRIPRDHRDASAGFLSLEDLRVGDAVCIYSKV 247
                     56679*************966666666666**************************************55555899******************* PP

         DUF1126  96 fllldcdeft 105
                     f+++ c + t
  XP_001704987.1 248 FYIYGCNDST 257
                     ******9876 PP

  == domain 2  score: 116.5 bits;  conditional E-value: 2.4e-38
         DUF1126   2 kkflendrkvLrFyalwddkresleeeerkfvisyyleDdtieikEprqrNsG..ikggkflkRqklpkpeeea..........kgeyytpkdln 84 
                      kfl +dr+vLrFya+wd+ r+  ++e r+++i+++l+Ddt+e+ E+ ++NsG  + ++ fl+Rqk+pk++  +          ++e++ ++d++
  XP_001704987.1 312 AKFLRHDREVLRFYAIWDN-RHLVYGELRQLIIHFFLADDTVEVLEVLPQNSGrdP-FPAFLRRQKVPKQH--TmtqfaehslvTNEFFGARDFR 402
                     69*****************.89********************************55.9***********33..33578999999999******** PP

         DUF1126  85 vgatvnvfgrkfllldcdeft 105
                     +g++v+++gr+++++dcd++t
  XP_001704987.1 403 IGSVVSIYGRPVYIYDCDNYT 423
                     *******************98 PP

  == domain 3  score: 60.3 bits;  conditional E-value: 7.1e-21
         DUF1126   3 kflendrkvLrFyalwddk....resleeeerkfvisyyleDdtieikEprqrNs.GikggkflkRqklpkpeeea............kgeyytp 80 
                     +++++ + +LrF a++  +    + +  + +r+fvisy+ +D+t++++Ep++  + G+ g kfl+R+++ ++  ++            k+ y++ 
  XP_001704987.1 505 RWIKFGNLCLRFLAKFAPCdcnkPVHITQADRQFVISYFFSDGTVSVFEPTETTTpGF-GYKFLERSRIVNEAATEaqdlagtglqskKKIYIDF 598
                     58888999********9988777777889999******************99976368.99********9933333578999999875555**** PP

         DUF1126  81 kdlnvgatvnvfgrkfllldcdeft 105
                     +dl vg++v ++ + f+++++de t
  XP_001704987.1 599 TDLDVGKVVVLNAHCFEIVEADERT 623
                     **********************976 PP



Or compare XP_001704987.1 to CDD or PaperBLAST