PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS215859 to PF06568 (DUF1127)

VIMSS215859 has 71 amino acids

Query:       DUF1127  [M=37]
Accession:   PF06568.11
Description: Domain of unknown function (DUF1127)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.7e-13   34.5   7.5    9.6e-13   34.0   7.5    1.3  1  VIMSS215859  


Domain annotation for each sequence (and alignments):
>> VIMSS215859  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   7.5   9.6e-13   9.6e-13       2      36 ..      27      61 ..      26      62 .. 0.93

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 9.6e-13
      DUF1127  2 laalrrWrrrRrtrreLarLsDreLaDIGlsRsdi 36
                 l++l  W+rr+ +rr+LarL+ r+LaD G+s s++
  VIMSS215859 27 LSTLLLWQRRMTSRRQLARLDSRLLADAGISESQR 61
                 578889***************************97 PP



Or compare VIMSS215859 to CDD or PaperBLAST