PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::AAC64927.1 to PF06722 (DUF1205)

CAZy::AAC64927.1 has 379 amino acids

Query:       DUF1205  [M=95]
Accession:   PF06722.12
Description: Protein of unknown function (DUF1205)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    5.4e-12   32.0   0.0    1.2e-11   31.0   0.0    1.6  1  CAZy::AAC64927.1  


Domain annotation for each sequence (and alignments):
>> CAZy::AAC64927.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.0   0.0   1.2e-11   1.2e-11       2      84 ..     171     254 ..     170     264 .. 0.84

  Alignments for each domain:
  == domain 1  score: 31.0 bits;  conditional E-value: 1.2e-11
                       E-S-GGGS------EEE-------SS----GGGSS--SS-EEEEE-------..------STTTTHHHHHTSSSEEEE---TTTT CS
           DUF1205   2 dvaPpslrlddgketvsmryvpyNgasvveeWlkkksarkRvcvtlGtskae..dladadlleavldqvaelDaEivvaldeear 84 
                       d++ psl+   g+ + +mry+p  g++ ++ Wl +  + + vc+t G + ++        l++++   + +l  E+vva+d   +
  CAZy::AAC64927.1 171 DTCSPSLQH-PGTVGDPMRYIPVTGPAELPGWLDEPRKLPLVCLTFGSVLPSlaPDRMRGLITRLTHTLPALGVEVVVAIDPAGT 254
                       778888875.567789***********************************96333446799*****************997655 PP



Or compare CAZy::AAC64927.1 to CDD or PaperBLAST