PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::AAD13559.1 to PF06722 (DUF1205)

CAZy::AAD13559.1 has 401 amino acids

Query:       DUF1205  [M=95]
Accession:   PF06722.12
Description: Protein of unknown function (DUF1205)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    9.3e-14   37.7   0.0    2.7e-13   36.2   0.0    1.8  1  CAZy::AAD13559.1  


Domain annotation for each sequence (and alignments):
>> CAZy::AAD13559.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.2   0.0   2.7e-13   2.7e-13       2      95 .]     179     282 ..     178     282 .. 0.87

  Alignments for each domain:
  == domain 1  score: 36.2 bits;  conditional E-value: 2.7e-13
                       E-S-GGGS------EEE-------SS----GGGSS-..-SS.........-EEEEE-------------STTTTHHHHHTSSS.EEEE---TT CS
           DUF1205   2 dvaPpslrlddgketvsmryvpyNgasvveeWlkkk..sar.........kRvcvtlGtskaedladadlleavldqvaelDa.Eivvaldee 82 
                       d++Pp+l+l d ++++++r+    g+  +++Wl+++  +           +Rv+v+lG s+   l++ +l++ +l + ++l + E vv++d e
  CAZy::AAD13559.1 179 DPCPPTLQLPDVTPGTPIRHAHSHGNGNLPDWLRAEwaA-AaadpaadrpRRVIVSLGRSTLA-LNGVPLFRSILRAFVDLPGvEAVVTVDRE 269
                       99*******************************986421.122333344579**********9.999**************754********* PP

                       TTSS-SS--SSEE CS
           DUF1205  83 arselrelpdnvR 95 
                       +r el+e p +vR
  CAZy::AAD13559.1 270 HRAELGEPPAGVR 282
                       ***********99 PP



Or compare CAZy::AAD13559.1 to CDD or PaperBLAST