PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::AAD55583.1 to PF06722 (DUF1205)

CAZy::AAD55583.1 has 396 amino acids

Query:       DUF1205  [M=95]
Accession:   PF06722.12
Description: Protein of unknown function (DUF1205)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    1.5e-20   59.5   0.0      3e-20   58.5   0.0    1.6  1  CAZy::AAD55583.1  


Domain annotation for each sequence (and alignments):
>> CAZy::AAD55583.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.5   0.0     3e-20     3e-20       1      95 []     181     278 ..     181     278 .. 0.91

  Alignments for each domain:
  == domain 1  score: 58.5 bits;  conditional E-value: 3e-20
                       EE-S-GGGS------EEE-------SS---..-GGGSS--SS-EEEEE-------.------STTTTHHHHHTSSSEEEE---TTTTSS-SS- CS
           DUF1205   1 idvaPpslrlddgketvsmryvpyNgasvv..eeWlkkksarkRvcvtlGtskae.dladadlleavldqvaelDaEivvaldeearselrel 90 
                       +d++Ppsl++    +   ++yvpyNga     +e  +++  r+Rvc+t G s ++   + a ll +v+ ++  lD Eivva d+    +l+el
  CAZy::AAD55583.1 181 VDPCPPSLQPPASPARLQVQYVPYNGAGRApgPELRRTDKSRPRVCLTWGRSITRiMGERAFLLPRVVRALDGLDIEIVVAADAATHAKLGEL 273
                       79***********************9866511566667799************99777788999***************************** PP

                       -SSEE CS
           DUF1205  91 pdnvR 95 
                       pdnvR
  CAZy::AAD55583.1 274 PDNVR 278
                       ****9 PP



Or compare CAZy::AAD55583.1 to CDD or PaperBLAST