PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::ABX71119.1 to PF06722 (DUF1205)

CAZy::ABX71119.1 has 429 amino acids

Query:       DUF1205  [M=95]
Accession:   PF06722.12
Description: Protein of unknown function (DUF1205)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
      7e-26   76.5   0.0    1.4e-25   75.5   0.0    1.5  1  CAZy::ABX71119.1  


Domain annotation for each sequence (and alignments):
>> CAZy::ABX71119.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.5   0.0   1.4e-25   1.4e-25       1      95 []     210     306 ..     210     306 .. 0.97

  Alignments for each domain:
  == domain 1  score: 75.5 bits;  conditional E-value: 1.4e-25
                       EE-S-GGGS------EEE-------SS----GGGSS--SS-EEEEE-------..------STTTTHHHHHTSSSEEEE---TTTTSS-SS-- CS
           DUF1205   1 idvaPpslrlddgketvsmryvpyNgasvveeWlkkksarkRvcvtlGtskae..dladadlleavldqvaelDaEivvaldeearselrelp 91 
                       +d++P+ +rl    e v++r vpy ga  v+eWl++++ ++Rvc+tlG+s+++  ++++   +++++d+va++D E+v++l++++   +r +p
  CAZy::ABX71119.1 210 VDPMPADMRLPVDLEYVPVRRVPYTGAQAVPEWLHERPRKPRVCLTLGVSNRKffGQDSRLPMAELFDAVADMDIELVATLNADQLASVRRIP 302
                       799********9*****************************************8888888889****************************** PP

                       SSEE CS
           DUF1205  92 dnvR 95 
                       dnvR
  CAZy::ABX71119.1 303 DNVR 306
                       ***9 PP



Or compare CAZy::ABX71119.1 to CDD or PaperBLAST