PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::CAE17548.1 to PF06722 (DUF1205)

CAZy::CAE17548.1 has 396 amino acids

Query:       DUF1205  [M=95]
Accession:   PF06722.12
Description: Protein of unknown function (DUF1205)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    1.8e-20   59.2   0.1    3.5e-20   58.3   0.1    1.5  1  CAZy::CAE17548.1  


Domain annotation for each sequence (and alignments):
>> CAZy::CAE17548.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   58.3   0.1   3.5e-20   3.5e-20       2      95 .]     173     264 ..     172     264 .. 0.85

  Alignments for each domain:
  == domain 1  score: 58.3 bits;  conditional E-value: 3.5e-20
                       E-S-GGGS-..-----EEE-------SS----GGGSS--SS-EEEEE-------------STTTTHHHHHTSSSEEEE---TTTTSS-SS--S CS
           DUF1205   2 dvaPpslrl..ddgketvsmryvpyNgasvveeWlkkksarkRvcvtlGtskaedladadlleavldqvaelDaEivvaldeearselrelpd 92 
                       dv+ p ++     ++++  mryvpyNg++ v++W  + +ar+RvcvtlG + a ++    l+++vl ++ ++Da++v+a d   +++l+ lp+
  CAZy::CAE17548.1 173 DVCSPRMQRpdPRAVPVRRMRYVPYNGSAPVPPWALRPAARPRVCVTLGSVPAAGVP--GLWAEVLTAMDRMDADVVLATDP--AQDLGPLPP 261
                       7777777663334788999******************************99888555..8*****************99875..456899999 PP

                       SEE CS
           DUF1205  93 nvR 95 
                        vR
  CAZy::CAE17548.1 262 TVR 264
                       988 PP



Or compare CAZy::CAE17548.1 to CDD or PaperBLAST