PaperBLAST – Find papers about a protein or its homologs

 

Align metacyc::MONOMER-18364 to PF06722 (DUF1205)

metacyc::MONOMER-18364 has 428 amino acids

Query:       DUF1205  [M=95]
Accession:   PF06722.12
Description: Protein of unknown function (DUF1205)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    1.3e-33  101.3   0.0    2.5e-33  100.4   0.0    1.5  1  metacyc::MONOMER-18364  


Domain annotation for each sequence (and alignments):
>> metacyc::MONOMER-18364  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  100.4   0.0   2.5e-33   2.5e-33       1      95 []     207     302 ..     207     302 .. 0.97

  Alignments for each domain:
  == domain 1  score: 100.4 bits;  conditional E-value: 2.5e-33
                             EE-S-GGGS------EEE-------SS----GGGSS--SS-EEEEE-------.------STTTTHHHHHTSSSEEEE---TTTTSS CS
                 DUF1205   1 idvaPpslrlddgketvsmryvpyNgasvveeWlkkksarkRvcvtlGtskae.dladadlleavldqvaelDaEivvaldeearse 86 
                             +d++Ppslrl +g +t +mryvpyNg svv++Wl++ + r+Rvc+tlG+s +e    d ++++ +++ +a+lD E+v++ld  +r+e
  metacyc::MONOMER-18364 207 VDPTPPSLRLPTGLPTLGMRYVPYNGRSVVPDWLRTPPRRPRVCLTLGVSAREvLGGDGVSVADLVNGLADLDIELVATLDTAQREE 293
                             79***************************************************76778899************************** PP

                             -SS--SSEE CS
                 DUF1205  87 lrelpdnvR 95 
                             l+ lp+nvR
  metacyc::MONOMER-18364 294 LGRLPENVR 302
                             ********9 PP



Or compare metacyc::MONOMER-18364 to CDD or PaperBLAST